Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02836 and H281DRAFT_02837 are separated by 275 nucleotides H281DRAFT_02837 and H281DRAFT_02838 are separated by 173 nucleotides H281DRAFT_02838 and H281DRAFT_02839 are separated by 90 nucleotides H281DRAFT_02839 and H281DRAFT_02840 overlap by 4 nucleotides
H281DRAFT_02836: H281DRAFT_02836 - Outer membrane protein (porin), at 427,972 to 429,078
_02836
H281DRAFT_02837: H281DRAFT_02837 - multiple antibiotic resistance protein, at 429,354 to 430,034
_02837
H281DRAFT_02838: H281DRAFT_02838 - hypothetical protein, at 430,208 to 430,327
_02838
H281DRAFT_02839: H281DRAFT_02839 - Protein of unknown function (DUF3311), at 430,418 to 430,633
_02839
H281DRAFT_02840: H281DRAFT_02840 - solute:Na+ symporter, SSS family, at 430,630 to 432,102
_02840
Position (kb) 429
430
431 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 428.451 kb on - strand, within H281DRAFT_02836 at 428.607 kb on - strand, within H281DRAFT_02836 at 428.616 kb on + strand, within H281DRAFT_02836 at 428.958 kb on + strand, within H281DRAFT_02836 at 429.001 kb on + strand at 429.001 kb on + strand at 429.002 kb on - strand at 429.002 kb on - strand at 429.008 kb on - strand at 429.024 kb on - strand at 429.081 kb on + strand at 429.082 kb on - strand at 429.178 kb on + strand at 429.230 kb on + strand at 429.231 kb on - strand at 429.257 kb on - strand at 429.468 kb on + strand, within H281DRAFT_02837 at 429.477 kb on - strand, within H281DRAFT_02837 at 429.520 kb on + strand at 429.599 kb on + strand, within H281DRAFT_02837 at 429.599 kb on + strand, within H281DRAFT_02837 at 429.599 kb on + strand, within H281DRAFT_02837 at 429.605 kb on + strand, within H281DRAFT_02837 at 429.867 kb on + strand, within H281DRAFT_02837 at 430.099 kb on + strand at 430.167 kb on + strand at 430.191 kb on + strand at 430.191 kb on + strand at 430.196 kb on - strand at 430.196 kb on - strand at 430.315 kb on + strand, within H281DRAFT_02838 at 430.330 kb on + strand at 430.331 kb on - strand at 430.358 kb on - strand at 430.394 kb on - strand at 430.397 kb on + strand at 430.397 kb on + strand at 430.431 kb on + strand at 430.432 kb on - strand at 430.574 kb on + strand, within H281DRAFT_02839 at 430.789 kb on - strand, within H281DRAFT_02840 at 430.849 kb on + strand, within H281DRAFT_02840 at 430.850 kb on - strand, within H281DRAFT_02840 at 430.861 kb on + strand, within H281DRAFT_02840 at 430.876 kb on + strand, within H281DRAFT_02840 at 430.877 kb on - strand, within H281DRAFT_02840 at 430.966 kb on + strand, within H281DRAFT_02840
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 428,451 - H281DRAFT_02836 0.43 -0.3 428,607 - H281DRAFT_02836 0.57 -0.2 428,616 + H281DRAFT_02836 0.58 +0.4 428,958 + H281DRAFT_02836 0.89 -0.3 429,001 + -0.2 429,001 + -0.1 429,002 - +0.7 429,002 - +0.2 429,008 - +0.1 429,024 - -0.2 429,081 + +0.2 429,082 - -2.8 429,178 + +0.3 429,230 + -0.1 429,231 - -2.7 429,257 - -2.2 429,468 + H281DRAFT_02837 0.17 -0.5 429,477 - H281DRAFT_02837 0.18 -2.2 429,520 + -0.1 429,599 + H281DRAFT_02837 0.36 -0.1 429,599 + H281DRAFT_02837 0.36 -1.1 429,599 + H281DRAFT_02837 0.36 -0.4 429,605 + H281DRAFT_02837 0.37 -1.1 429,867 + H281DRAFT_02837 0.75 -0.7 430,099 + -0.9 430,167 + -0.6 430,191 + -0.7 430,191 + -1.0 430,196 - -3.0 430,196 - -2.1 430,315 + H281DRAFT_02838 0.89 -0.7 430,330 + +0.9 430,331 - -0.4 430,358 - -2.0 430,394 - -1.3 430,397 + -0.2 430,397 + -0.7 430,431 + -0.7 430,432 - -1.0 430,574 + H281DRAFT_02839 0.72 -1.7 430,789 - H281DRAFT_02840 0.11 -0.3 430,849 + H281DRAFT_02840 0.15 -0.4 430,850 - H281DRAFT_02840 0.15 -1.7 430,861 + H281DRAFT_02840 0.16 -0.0 430,876 + H281DRAFT_02840 0.17 -1.9 430,877 - H281DRAFT_02840 0.17 -0.5 430,966 + H281DRAFT_02840 0.23 +0.2
Or see this region's nucleotide sequence