Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01533 and H281DRAFT_01534 are separated by 109 nucleotides H281DRAFT_01534 and H281DRAFT_01535 are separated by 191 nucleotides
H281DRAFT_01533: H281DRAFT_01533 - transcriptional regulator, LysR family, at 405,013 to 405,933
_01533
H281DRAFT_01534: H281DRAFT_01534 - tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase, at 406,043 to 407,137
_01534
H281DRAFT_01535: H281DRAFT_01535 - MFS transporter, ACS family, tartrate transporter, at 407,329 to 408,639
_01535
Position (kb) 406
407
408 Strain fitness (log2 ratio) -1
0
1 at 405.099 kb on - strand at 405.414 kb on - strand, within H281DRAFT_01533 at 405.414 kb on - strand, within H281DRAFT_01533 at 405.731 kb on + strand, within H281DRAFT_01533 at 405.997 kb on + strand at 405.998 kb on - strand at 406.187 kb on + strand, within H281DRAFT_01534 at 406.995 kb on + strand, within H281DRAFT_01534 at 407.066 kb on - strand at 407.195 kb on - strand at 407.195 kb on - strand at 407.391 kb on - strand at 407.401 kb on + strand at 407.591 kb on + strand, within H281DRAFT_01535 at 407.592 kb on - strand, within H281DRAFT_01535 at 407.650 kb on + strand, within H281DRAFT_01535 at 407.651 kb on - strand, within H281DRAFT_01535 at 407.863 kb on + strand, within H281DRAFT_01535 at 407.914 kb on + strand, within H281DRAFT_01535 at 408.083 kb on - strand, within H281DRAFT_01535 at 408.107 kb on - strand, within H281DRAFT_01535
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 405,099 - -0.3 405,414 - H281DRAFT_01533 0.44 -0.4 405,414 - H281DRAFT_01533 0.44 -0.0 405,731 + H281DRAFT_01533 0.78 -0.3 405,997 + +0.0 405,998 - -0.3 406,187 + H281DRAFT_01534 0.13 +0.6 406,995 + H281DRAFT_01534 0.87 +0.3 407,066 - -0.2 407,195 - +0.7 407,195 - -0.0 407,391 - +0.5 407,401 + +0.4 407,591 + H281DRAFT_01535 0.20 -0.3 407,592 - H281DRAFT_01535 0.20 +0.7 407,650 + H281DRAFT_01535 0.24 +0.2 407,651 - H281DRAFT_01535 0.25 +0.3 407,863 + H281DRAFT_01535 0.41 -0.3 407,914 + H281DRAFT_01535 0.45 -0.0 408,083 - H281DRAFT_01535 0.58 +0.3 408,107 - H281DRAFT_01535 0.59 -0.3
Or see this region's nucleotide sequence