Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06341 and H281DRAFT_06342 are separated by 185 nucleotides H281DRAFT_06342 and H281DRAFT_06343 are separated by 53 nucleotides H281DRAFT_06343 and H281DRAFT_06344 are separated by 6 nucleotides
H281DRAFT_06341: H281DRAFT_06341 - glyoxylate/hydroxypyruvate reductase A, at 15,271 to 16,197
_06341
H281DRAFT_06342: H281DRAFT_06342 - Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, at 16,383 to 17,804
_06342
H281DRAFT_06343: H281DRAFT_06343 - transcriptional regulator, AsnC family, at 17,858 to 18,355
_06343
H281DRAFT_06344: H281DRAFT_06344 - transcriptional regulator, LysR family, at 18,362 to 19,285
_06344
Position (kb) 16
17
18 Strain fitness (log2 ratio) -1
0
1 at 15.562 kb on + strand, within H281DRAFT_06341 at 15.773 kb on + strand, within H281DRAFT_06341 at 15.773 kb on + strand, within H281DRAFT_06341 at 15.774 kb on - strand, within H281DRAFT_06341 at 15.791 kb on - strand, within H281DRAFT_06341 at 16.183 kb on - strand at 16.193 kb on - strand at 16.196 kb on - strand at 16.196 kb on - strand at 16.338 kb on + strand at 16.621 kb on - strand, within H281DRAFT_06342 at 16.632 kb on + strand at 16.633 kb on - strand, within H281DRAFT_06342 at 16.633 kb on - strand, within H281DRAFT_06342 at 16.633 kb on - strand, within H281DRAFT_06342 at 16.633 kb on - strand, within H281DRAFT_06342 at 16.936 kb on - strand, within H281DRAFT_06342 at 17.286 kb on + strand, within H281DRAFT_06342 at 17.341 kb on - strand, within H281DRAFT_06342 at 17.529 kb on - strand, within H281DRAFT_06342 at 17.803 kb on - strand at 17.803 kb on - strand at 17.846 kb on + strand at 17.847 kb on - strand at 18.012 kb on - strand, within H281DRAFT_06343 at 18.185 kb on + strand, within H281DRAFT_06343 at 18.282 kb on - strand, within H281DRAFT_06343 at 18.354 kb on - strand at 18.776 kb on + strand, within H281DRAFT_06344 at 18.776 kb on + strand, within H281DRAFT_06344
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 15,562 + H281DRAFT_06341 0.31 +0.5 15,773 + H281DRAFT_06341 0.54 -0.7 15,773 + H281DRAFT_06341 0.54 +0.2 15,774 - H281DRAFT_06341 0.54 -1.6 15,791 - H281DRAFT_06341 0.56 +0.7 16,183 - +0.1 16,193 - +0.3 16,196 - +0.4 16,196 - +0.0 16,338 + +1.1 16,621 - H281DRAFT_06342 0.17 +0.0 16,632 + +0.1 16,633 - H281DRAFT_06342 0.18 +1.5 16,633 - H281DRAFT_06342 0.18 +0.6 16,633 - H281DRAFT_06342 0.18 -0.1 16,633 - H281DRAFT_06342 0.18 -0.3 16,936 - H281DRAFT_06342 0.39 +0.1 17,286 + H281DRAFT_06342 0.64 -0.5 17,341 - H281DRAFT_06342 0.67 +0.1 17,529 - H281DRAFT_06342 0.81 +0.7 17,803 - +0.1 17,803 - +0.0 17,846 + +0.0 17,847 - -0.2 18,012 - H281DRAFT_06343 0.31 +1.0 18,185 + H281DRAFT_06343 0.66 +0.9 18,282 - H281DRAFT_06343 0.85 +0.1 18,354 - -0.6 18,776 + H281DRAFT_06344 0.45 +0.2 18,776 + H281DRAFT_06344 0.45 -0.5
Or see this region's nucleotide sequence