Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06108 and H281DRAFT_06109 are separated by 16 nucleotides H281DRAFT_06109 and H281DRAFT_06110 are separated by 59 nucleotides H281DRAFT_06110 and H281DRAFT_06111 are separated by 18 nucleotides
H281DRAFT_06108: H281DRAFT_06108 - hypothetical protein, at 128,407 to 128,706
_06108
H281DRAFT_06109: H281DRAFT_06109 - 3-oxoacyl-[acyl-carrier protein] reductase, at 128,723 to 129,481
_06109
H281DRAFT_06110: H281DRAFT_06110 - 3-oxoacyl-[acyl-carrier protein] reductase, at 129,541 to 130,296
_06110
H281DRAFT_06111: H281DRAFT_06111 - Sugar phosphate permease, at 130,315 to 131,652
_06111
Position (kb) 129
130
131 Strain fitness (log2 ratio) -2
-1
0
1
2 at 128.616 kb on - strand, within H281DRAFT_06108 at 128.747 kb on - strand at 129.009 kb on + strand, within H281DRAFT_06109 at 129.009 kb on + strand, within H281DRAFT_06109 at 129.010 kb on - strand, within H281DRAFT_06109 at 129.010 kb on - strand, within H281DRAFT_06109 at 129.396 kb on + strand, within H281DRAFT_06109 at 129.599 kb on + strand at 129.599 kb on + strand at 129.599 kb on + strand at 129.599 kb on + strand at 129.600 kb on - strand at 129.675 kb on + strand, within H281DRAFT_06110 at 129.768 kb on + strand, within H281DRAFT_06110 at 129.869 kb on + strand, within H281DRAFT_06110 at 129.870 kb on - strand, within H281DRAFT_06110 at 130.049 kb on + strand, within H281DRAFT_06110 at 130.165 kb on + strand, within H281DRAFT_06110 at 130.166 kb on - strand, within H281DRAFT_06110 at 130.166 kb on - strand, within H281DRAFT_06110 at 130.279 kb on + strand at 130.283 kb on - strand at 130.283 kb on - strand at 130.283 kb on - strand at 130.288 kb on + strand at 130.524 kb on - strand, within H281DRAFT_06111 at 130.556 kb on + strand, within H281DRAFT_06111 at 130.677 kb on + strand, within H281DRAFT_06111 at 130.677 kb on + strand, within H281DRAFT_06111 at 130.678 kb on - strand, within H281DRAFT_06111 at 130.722 kb on - strand, within H281DRAFT_06111 at 130.731 kb on - strand, within H281DRAFT_06111 at 130.786 kb on - strand, within H281DRAFT_06111 at 130.833 kb on + strand, within H281DRAFT_06111 at 130.935 kb on - strand, within H281DRAFT_06111 at 131.010 kb on + strand, within H281DRAFT_06111 at 131.011 kb on - strand, within H281DRAFT_06111 at 131.011 kb on - strand, within H281DRAFT_06111 at 131.011 kb on - strand, within H281DRAFT_06111 at 131.187 kb on + strand, within H281DRAFT_06111 at 131.246 kb on + strand, within H281DRAFT_06111 at 131.246 kb on + strand, within H281DRAFT_06111 at 131.246 kb on + strand, within H281DRAFT_06111 at 131.247 kb on - strand, within H281DRAFT_06111
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 128,616 - H281DRAFT_06108 0.70 +0.2 128,747 - -0.1 129,009 + H281DRAFT_06109 0.38 -0.3 129,009 + H281DRAFT_06109 0.38 +0.1 129,010 - H281DRAFT_06109 0.38 +0.1 129,010 - H281DRAFT_06109 0.38 -0.5 129,396 + H281DRAFT_06109 0.89 +1.5 129,599 + -2.2 129,599 + -0.6 129,599 + -0.1 129,599 + -1.2 129,600 - +0.1 129,675 + H281DRAFT_06110 0.18 +0.6 129,768 + H281DRAFT_06110 0.30 +0.6 129,869 + H281DRAFT_06110 0.43 -1.1 129,870 - H281DRAFT_06110 0.44 -0.7 130,049 + H281DRAFT_06110 0.67 -0.9 130,165 + H281DRAFT_06110 0.83 +0.2 130,166 - H281DRAFT_06110 0.83 +0.2 130,166 - H281DRAFT_06110 0.83 +0.4 130,279 + -0.3 130,283 - +0.5 130,283 - +0.1 130,283 - +0.2 130,288 + +0.1 130,524 - H281DRAFT_06111 0.16 +2.7 130,556 + H281DRAFT_06111 0.18 +1.0 130,677 + H281DRAFT_06111 0.27 -0.1 130,677 + H281DRAFT_06111 0.27 +0.1 130,678 - H281DRAFT_06111 0.27 -1.0 130,722 - H281DRAFT_06111 0.30 +0.1 130,731 - H281DRAFT_06111 0.31 +1.2 130,786 - H281DRAFT_06111 0.35 +0.1 130,833 + H281DRAFT_06111 0.39 +0.5 130,935 - H281DRAFT_06111 0.46 +0.5 131,010 + H281DRAFT_06111 0.52 +2.0 131,011 - H281DRAFT_06111 0.52 -0.0 131,011 - H281DRAFT_06111 0.52 -0.1 131,011 - H281DRAFT_06111 0.52 -0.2 131,187 + H281DRAFT_06111 0.65 -0.2 131,246 + H281DRAFT_06111 0.70 +0.0 131,246 + H281DRAFT_06111 0.70 +0.8 131,246 + H281DRAFT_06111 0.70 +2.7 131,247 - H281DRAFT_06111 0.70 -1.0
Or see this region's nucleotide sequence