Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01471 and H281DRAFT_01472 are separated by 233 nucleotides H281DRAFT_01472 and H281DRAFT_01473 are separated by 18 nucleotides
H281DRAFT_01471: H281DRAFT_01471 - MFS transporter, OFA family, oxalate/formate antiporter, at 338,388 to 339,725
_01471
H281DRAFT_01472: H281DRAFT_01472 - Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family, at 339,959 to 340,420
_01472
H281DRAFT_01473: H281DRAFT_01473 - transcriptional regulator, AraC family, at 340,439 to 341,383
_01473
Position (kb) 339
340
341 Strain fitness (log2 ratio) -1
0
1 at 339.072 kb on + strand, within H281DRAFT_01471 at 339.285 kb on - strand, within H281DRAFT_01471 at 339.438 kb on + strand, within H281DRAFT_01471 at 339.438 kb on + strand, within H281DRAFT_01471 at 339.439 kb on - strand, within H281DRAFT_01471 at 339.439 kb on - strand, within H281DRAFT_01471 at 339.439 kb on - strand, within H281DRAFT_01471 at 339.439 kb on - strand, within H281DRAFT_01471 at 339.439 kb on - strand, within H281DRAFT_01471 at 339.439 kb on - strand, within H281DRAFT_01471 at 339.478 kb on - strand, within H281DRAFT_01471 at 339.478 kb on - strand, within H281DRAFT_01471 at 339.672 kb on + strand at 339.673 kb on - strand at 339.673 kb on - strand at 339.689 kb on - strand at 340.029 kb on - strand, within H281DRAFT_01472 at 340.038 kb on + strand, within H281DRAFT_01472 at 340.039 kb on - strand, within H281DRAFT_01472 at 340.061 kb on + strand, within H281DRAFT_01472 at 340.238 kb on + strand, within H281DRAFT_01472 at 340.239 kb on - strand, within H281DRAFT_01472 at 340.239 kb on - strand, within H281DRAFT_01472 at 340.441 kb on - strand at 340.441 kb on - strand at 340.516 kb on + strand at 340.517 kb on - strand at 340.548 kb on + strand, within H281DRAFT_01473 at 340.549 kb on - strand, within H281DRAFT_01473 at 340.845 kb on + strand, within H281DRAFT_01473 at 341.057 kb on + strand, within H281DRAFT_01473 at 341.058 kb on - strand, within H281DRAFT_01473 at 341.058 kb on - strand, within H281DRAFT_01473 at 341.062 kb on - strand, within H281DRAFT_01473 at 341.149 kb on - strand, within H281DRAFT_01473 at 341.149 kb on - strand, within H281DRAFT_01473 at 341.415 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 339,072 + H281DRAFT_01471 0.51 +0.1 339,285 - H281DRAFT_01471 0.67 +0.1 339,438 + H281DRAFT_01471 0.78 -0.1 339,438 + H281DRAFT_01471 0.78 +0.2 339,439 - H281DRAFT_01471 0.79 +0.2 339,439 - H281DRAFT_01471 0.79 -0.8 339,439 - H281DRAFT_01471 0.79 -0.5 339,439 - H281DRAFT_01471 0.79 +1.1 339,439 - H281DRAFT_01471 0.79 -0.1 339,439 - H281DRAFT_01471 0.79 -1.3 339,478 - H281DRAFT_01471 0.81 -0.4 339,478 - H281DRAFT_01471 0.81 -0.3 339,672 + -1.1 339,673 - +0.0 339,673 - -0.3 339,689 - -0.4 340,029 - H281DRAFT_01472 0.15 -0.6 340,038 + H281DRAFT_01472 0.17 -1.6 340,039 - H281DRAFT_01472 0.17 -1.3 340,061 + H281DRAFT_01472 0.22 -0.6 340,238 + H281DRAFT_01472 0.60 -1.2 340,239 - H281DRAFT_01472 0.61 +0.1 340,239 - H281DRAFT_01472 0.61 +0.0 340,441 - +0.0 340,441 - -1.2 340,516 + -0.5 340,517 - -0.1 340,548 + H281DRAFT_01473 0.12 +0.4 340,549 - H281DRAFT_01473 0.12 -0.5 340,845 + H281DRAFT_01473 0.43 +0.7 341,057 + H281DRAFT_01473 0.65 -0.6 341,058 - H281DRAFT_01473 0.66 -0.3 341,058 - H281DRAFT_01473 0.66 +0.5 341,062 - H281DRAFT_01473 0.66 -0.4 341,149 - H281DRAFT_01473 0.75 -0.6 341,149 - H281DRAFT_01473 0.75 -0.2 341,415 + -0.1
Or see this region's nucleotide sequence