Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04462 and H281DRAFT_04463 are separated by 277 nucleotides H281DRAFT_04463 and H281DRAFT_04464 overlap by 8 nucleotides
H281DRAFT_04462: H281DRAFT_04462 - monosaccharide ABC transporter substrate-binding protein, CUT2 family, at 186,168 to 187,214
_04462
H281DRAFT_04463: H281DRAFT_04463 - transcriptional regulator, RpiR family, at 187,492 to 188,373
_04463
H281DRAFT_04464: H281DRAFT_04464 - myo-inositol 2-dehydrogenase, at 188,366 to 189,385
_04464
Position (kb) 187
188
189 Strain fitness (log2 ratio) -2
-1
0
1 at 186.587 kb on - strand, within H281DRAFT_04462 at 186.650 kb on - strand, within H281DRAFT_04462 at 186.784 kb on + strand, within H281DRAFT_04462 at 186.890 kb on + strand, within H281DRAFT_04462 at 186.891 kb on - strand, within H281DRAFT_04462 at 187.064 kb on + strand, within H281DRAFT_04462 at 187.327 kb on + strand at 187.471 kb on + strand at 187.555 kb on - strand at 187.559 kb on - strand at 187.559 kb on - strand at 187.597 kb on + strand, within H281DRAFT_04463 at 187.597 kb on + strand, within H281DRAFT_04463 at 187.600 kb on - strand, within H281DRAFT_04463 at 187.747 kb on + strand, within H281DRAFT_04463 at 187.747 kb on + strand, within H281DRAFT_04463 at 187.747 kb on + strand, within H281DRAFT_04463 at 187.748 kb on - strand, within H281DRAFT_04463 at 187.749 kb on + strand, within H281DRAFT_04463 at 187.952 kb on - strand, within H281DRAFT_04463 at 187.952 kb on - strand, within H281DRAFT_04463 at 188.000 kb on - strand, within H281DRAFT_04463 at 188.056 kb on + strand, within H281DRAFT_04463 at 188.138 kb on - strand, within H281DRAFT_04463 at 188.234 kb on - strand, within H281DRAFT_04463 at 188.337 kb on - strand at 188.472 kb on - strand, within H281DRAFT_04464 at 188.472 kb on - strand, within H281DRAFT_04464 at 188.488 kb on + strand, within H281DRAFT_04464 at 189.145 kb on + strand, within H281DRAFT_04464 at 189.162 kb on - strand, within H281DRAFT_04464
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 186,587 - H281DRAFT_04462 0.40 -1.0 186,650 - H281DRAFT_04462 0.46 -0.5 186,784 + H281DRAFT_04462 0.59 -0.5 186,890 + H281DRAFT_04462 0.69 +0.1 186,891 - H281DRAFT_04462 0.69 -1.0 187,064 + H281DRAFT_04462 0.86 -0.1 187,327 + -0.0 187,471 + -0.4 187,555 - -0.7 187,559 - -1.3 187,559 - +1.3 187,597 + H281DRAFT_04463 0.12 -2.7 187,597 + H281DRAFT_04463 0.12 +0.5 187,600 - H281DRAFT_04463 0.12 -1.2 187,747 + H281DRAFT_04463 0.29 +1.3 187,747 + H281DRAFT_04463 0.29 -0.9 187,747 + H281DRAFT_04463 0.29 +0.6 187,748 - H281DRAFT_04463 0.29 -1.6 187,749 + H281DRAFT_04463 0.29 +0.2 187,952 - H281DRAFT_04463 0.52 -0.4 187,952 - H281DRAFT_04463 0.52 -1.1 188,000 - H281DRAFT_04463 0.58 -1.7 188,056 + H281DRAFT_04463 0.64 -0.0 188,138 - H281DRAFT_04463 0.73 -0.9 188,234 - H281DRAFT_04463 0.84 -1.3 188,337 - -1.0 188,472 - H281DRAFT_04464 0.10 -0.1 188,472 - H281DRAFT_04464 0.10 +0.2 188,488 + H281DRAFT_04464 0.12 -0.5 189,145 + H281DRAFT_04464 0.76 +0.2 189,162 - H281DRAFT_04464 0.78 +0.0
Or see this region's nucleotide sequence