Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02764 and H281DRAFT_02765 are separated by 98 nucleotides H281DRAFT_02765 and H281DRAFT_02766 are separated by 146 nucleotides H281DRAFT_02766 and H281DRAFT_02767 are separated by 429 nucleotides
H281DRAFT_02764: H281DRAFT_02764 - hypothetical protein, at 352,631 to 353,308
_02764
H281DRAFT_02765: H281DRAFT_02765 - Protein of unknown function (DUF2795), at 353,407 to 353,640
_02765
H281DRAFT_02766: H281DRAFT_02766 - hypothetical protein, at 353,787 to 355,844
_02766
H281DRAFT_02767: H281DRAFT_02767 - Uncharacterized protein conserved in bacteria, putative lipoprotein, at 356,274 to 357,077
_02767
Position (kb) 353
354
355
356 Strain fitness (log2 ratio) -2
-1
0
1 at 353.180 kb on + strand, within H281DRAFT_02764 at 353.181 kb on - strand, within H281DRAFT_02764 at 353.191 kb on - strand, within H281DRAFT_02764 at 353.392 kb on + strand at 353.716 kb on - strand at 353.727 kb on + strand at 353.956 kb on - strand at 354.085 kb on - strand, within H281DRAFT_02766 at 354.144 kb on + strand, within H281DRAFT_02766 at 354.543 kb on + strand, within H281DRAFT_02766 at 354.544 kb on - strand, within H281DRAFT_02766 at 354.544 kb on - strand, within H281DRAFT_02766 at 354.781 kb on - strand, within H281DRAFT_02766 at 354.898 kb on + strand, within H281DRAFT_02766 at 354.898 kb on - strand, within H281DRAFT_02766 at 354.922 kb on - strand, within H281DRAFT_02766 at 355.311 kb on + strand, within H281DRAFT_02766 at 355.311 kb on + strand, within H281DRAFT_02766 at 355.312 kb on - strand, within H281DRAFT_02766 at 355.312 kb on - strand, within H281DRAFT_02766 at 355.336 kb on - strand, within H281DRAFT_02766 at 355.459 kb on - strand, within H281DRAFT_02766 at 356.178 kb on - strand at 356.200 kb on + strand at 356.204 kb on - strand at 356.245 kb on - strand at 356.245 kb on - strand at 356.344 kb on + strand at 356.362 kb on + strand, within H281DRAFT_02767 at 356.394 kb on + strand, within H281DRAFT_02767 at 356.395 kb on - strand, within H281DRAFT_02767 at 356.489 kb on - strand, within H281DRAFT_02767 at 356.627 kb on - strand, within H281DRAFT_02767 at 356.644 kb on - strand, within H281DRAFT_02767 at 356.672 kb on - strand, within H281DRAFT_02767 at 356.688 kb on + strand, within H281DRAFT_02767 at 356.727 kb on - strand, within H281DRAFT_02767 at 356.728 kb on + strand, within H281DRAFT_02767 at 356.728 kb on + strand, within H281DRAFT_02767 at 356.729 kb on - strand, within H281DRAFT_02767
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 353,180 + H281DRAFT_02764 0.81 -0.1 353,181 - H281DRAFT_02764 0.81 -1.1 353,191 - H281DRAFT_02764 0.83 +0.6 353,392 + -0.1 353,716 - +0.1 353,727 + -0.4 353,956 - -0.2 354,085 - H281DRAFT_02766 0.14 +0.1 354,144 + H281DRAFT_02766 0.17 -0.8 354,543 + H281DRAFT_02766 0.37 -0.7 354,544 - H281DRAFT_02766 0.37 +0.1 354,544 - H281DRAFT_02766 0.37 -0.6 354,781 - H281DRAFT_02766 0.48 +0.1 354,898 + H281DRAFT_02766 0.54 -0.8 354,898 - H281DRAFT_02766 0.54 +0.6 354,922 - H281DRAFT_02766 0.55 +0.0 355,311 + H281DRAFT_02766 0.74 -0.7 355,311 + H281DRAFT_02766 0.74 -0.4 355,312 - H281DRAFT_02766 0.74 -1.5 355,312 - H281DRAFT_02766 0.74 +0.0 355,336 - H281DRAFT_02766 0.75 -1.3 355,459 - H281DRAFT_02766 0.81 +0.3 356,178 - -2.1 356,200 + -0.9 356,204 - -1.1 356,245 - -0.1 356,245 - -0.0 356,344 + +0.0 356,362 + H281DRAFT_02767 0.11 -0.5 356,394 + H281DRAFT_02767 0.15 +0.0 356,395 - H281DRAFT_02767 0.15 -0.9 356,489 - H281DRAFT_02767 0.27 -0.5 356,627 - H281DRAFT_02767 0.44 -0.1 356,644 - H281DRAFT_02767 0.46 +0.2 356,672 - H281DRAFT_02767 0.50 -0.7 356,688 + H281DRAFT_02767 0.51 -0.6 356,727 - H281DRAFT_02767 0.56 -0.3 356,728 + H281DRAFT_02767 0.56 +0.3 356,728 + H281DRAFT_02767 0.56 -0.3 356,729 - H281DRAFT_02767 0.57 -0.2
Or see this region's nucleotide sequence