Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01367 and H281DRAFT_01368 are separated by 136 nucleotides H281DRAFT_01368 and H281DRAFT_01369 are separated by 184 nucleotides
H281DRAFT_01367: H281DRAFT_01367 - Protein of unknown function (DUF2891), at 210,034 to 211,044
_01367
H281DRAFT_01368: H281DRAFT_01368 - PRC-barrel domain-containing protein, at 211,181 to 211,606
_01368
H281DRAFT_01369: H281DRAFT_01369 - DNA damage-inducible DNA polymerase II, at 211,791 to 214,157
_01369
Position (kb) 211
212 Strain fitness (log2 ratio) -2
-1
0
1
2 at 210.190 kb on + strand, within H281DRAFT_01367 at 210.370 kb on + strand, within H281DRAFT_01367 at 210.407 kb on + strand, within H281DRAFT_01367 at 210.920 kb on + strand, within H281DRAFT_01367 at 210.920 kb on + strand, within H281DRAFT_01367 at 210.992 kb on - strand at 210.992 kb on - strand at 210.992 kb on - strand at 210.992 kb on - strand at 211.152 kb on + strand at 211.443 kb on + strand, within H281DRAFT_01368 at 211.609 kb on + strand at 211.609 kb on + strand at 211.609 kb on + strand at 211.610 kb on - strand at 212.041 kb on - strand, within H281DRAFT_01369 at 212.041 kb on - strand, within H281DRAFT_01369 at 212.107 kb on - strand, within H281DRAFT_01369 at 212.334 kb on + strand, within H281DRAFT_01369 at 212.334 kb on + strand, within H281DRAFT_01369 at 212.335 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 210,190 + H281DRAFT_01367 0.15 -0.4 210,370 + H281DRAFT_01367 0.33 +0.1 210,407 + H281DRAFT_01367 0.37 -0.2 210,920 + H281DRAFT_01367 0.88 -0.8 210,920 + H281DRAFT_01367 0.88 +0.2 210,992 - -0.5 210,992 - +0.3 210,992 - -2.5 210,992 - +1.9 211,152 + +0.2 211,443 + H281DRAFT_01368 0.62 -0.9 211,609 + +0.6 211,609 + -0.1 211,609 + +0.6 211,610 - +0.4 212,041 - H281DRAFT_01369 0.11 +0.3 212,041 - H281DRAFT_01369 0.11 +1.0 212,107 - H281DRAFT_01369 0.13 +0.3 212,334 + H281DRAFT_01369 0.23 -0.4 212,334 + H281DRAFT_01369 0.23 -0.0 212,335 - +1.1
Or see this region's nucleotide sequence