Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00805 and H281DRAFT_00806 are separated by 197 nucleotides H281DRAFT_00806 and H281DRAFT_00807 are separated by 25 nucleotides H281DRAFT_00807 and H281DRAFT_00808 are separated by 495 nucleotides
H281DRAFT_00805: H281DRAFT_00805 - dTDP-4-amino-4,6-dideoxygalactose transaminase, at 892,477 to 893,637
_00805
H281DRAFT_00806: H281DRAFT_00806 - Membrane transporters of cations and cationic drugs, at 893,835 to 894,206
_00806
H281DRAFT_00807: H281DRAFT_00807 - 4-amino-4-deoxy-L-arabinose transferase, at 894,232 to 895,953
_00807
H281DRAFT_00808: H281DRAFT_00808 - Uncharacterized conserved protein, contains Mth938-like domain, at 896,449 to 896,823
_00808
Position (kb) 894
895
896 Strain fitness (log2 ratio) -2
-1
0
1 at 893.642 kb on - strand at 893.642 kb on - strand at 893.758 kb on - strand at 893.795 kb on - strand at 893.795 kb on - strand at 893.851 kb on - strand at 893.851 kb on - strand at 893.851 kb on - strand at 893.851 kb on - strand at 893.921 kb on - strand, within H281DRAFT_00806 at 893.948 kb on - strand, within H281DRAFT_00806 at 894.029 kb on - strand, within H281DRAFT_00806 at 894.226 kb on - strand at 894.233 kb on + strand at 894.234 kb on - strand at 896.001 kb on - strand at 896.075 kb on - strand at 896.250 kb on + strand at 896.418 kb on + strand at 896.418 kb on + strand at 896.418 kb on + strand at 896.507 kb on + strand, within H281DRAFT_00808 at 896.507 kb on + strand, within H281DRAFT_00808 at 896.562 kb on + strand, within H281DRAFT_00808 at 896.563 kb on - strand, within H281DRAFT_00808 at 896.762 kb on + strand, within H281DRAFT_00808 at 896.788 kb on - strand at 896.816 kb on - strand at 896.816 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 893,642 - -0.5 893,642 - +0.1 893,758 - -0.0 893,795 - +0.1 893,795 - -0.6 893,851 - -0.6 893,851 - -0.0 893,851 - +0.1 893,851 - -0.2 893,921 - H281DRAFT_00806 0.23 +0.2 893,948 - H281DRAFT_00806 0.30 +0.7 894,029 - H281DRAFT_00806 0.52 +1.3 894,226 - -0.1 894,233 + -0.0 894,234 - -0.4 896,001 - -0.0 896,075 - -1.0 896,250 + -0.3 896,418 + +0.2 896,418 + +0.4 896,418 + +1.6 896,507 + H281DRAFT_00808 0.15 -0.9 896,507 + H281DRAFT_00808 0.15 -1.1 896,562 + H281DRAFT_00808 0.30 -1.9 896,563 - H281DRAFT_00808 0.30 -2.4 896,762 + H281DRAFT_00808 0.83 -1.0 896,788 - -0.3 896,816 - -1.4 896,816 - -1.3
Or see this region's nucleotide sequence