Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_00780

Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_00779 and H281DRAFT_00780 overlap by 4 nucleotidesH281DRAFT_00780 and H281DRAFT_00781 overlap by 1 nucleotides H281DRAFT_00779: H281DRAFT_00779 - sulfate transport system permease protein, at 865,558 to 866,454 _00779 H281DRAFT_00780: H281DRAFT_00780 - sulfate transport system permease protein, at 866,451 to 867,485 _00780 H281DRAFT_00781: H281DRAFT_00781 - sulfate transport system ATP-binding protein, at 867,485 to 868,543 _00781 Position (kb) 866 867 868Strain fitness (log2 ratio) -2 -1 0 1at 865.978 kb on - strand, within H281DRAFT_00779at 866.288 kb on - strand, within H281DRAFT_00779at 866.325 kb on - strand, within H281DRAFT_00779at 866.732 kb on + strand, within H281DRAFT_00780at 866.876 kb on + strand, within H281DRAFT_00780at 866.877 kb on - strand, within H281DRAFT_00780at 866.877 kb on - strand, within H281DRAFT_00780at 866.880 kb on + strand, within H281DRAFT_00780at 866.881 kb on - strand, within H281DRAFT_00780at 866.881 kb on - strand, within H281DRAFT_00780at 866.933 kb on + strand, within H281DRAFT_00780at 867.256 kb on - strand, within H281DRAFT_00780at 867.344 kb on + strand, within H281DRAFT_00780at 867.498 kb on + strandat 867.499 kb on - strandat 867.502 kb on + strandat 867.748 kb on + strand, within H281DRAFT_00781at 867.916 kb on + strand, within H281DRAFT_00781at 868.274 kb on - strand, within H281DRAFT_00781at 868.304 kb on + strand, within H281DRAFT_00781at 868.304 kb on + strand, within H281DRAFT_00781at 868.308 kb on + strand, within H281DRAFT_00781at 868.308 kb on + strand, within H281DRAFT_00781at 868.309 kb on - strand, within H281DRAFT_00781at 868.309 kb on - strand, within H281DRAFT_00781at 868.361 kb on - strand, within H281DRAFT_00781

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Per-strain Table

Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
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865,978 - H281DRAFT_00779 0.47 -0.5
866,288 - H281DRAFT_00779 0.81 -0.2
866,325 - H281DRAFT_00779 0.86 -1.0
866,732 + H281DRAFT_00780 0.27 -0.2
866,876 + H281DRAFT_00780 0.41 +0.4
866,877 - H281DRAFT_00780 0.41 -0.0
866,877 - H281DRAFT_00780 0.41 +0.2
866,880 + H281DRAFT_00780 0.41 -0.3
866,881 - H281DRAFT_00780 0.42 +0.5
866,881 - H281DRAFT_00780 0.42 -0.6
866,933 + H281DRAFT_00780 0.47 +0.3
867,256 - H281DRAFT_00780 0.78 -0.2
867,344 + H281DRAFT_00780 0.86 +0.2
867,498 + +0.2
867,499 - +0.1
867,502 + +0.2
867,748 + H281DRAFT_00781 0.25 -0.7
867,916 + H281DRAFT_00781 0.41 -0.1
868,274 - H281DRAFT_00781 0.75 +0.3
868,304 + H281DRAFT_00781 0.77 -0.1
868,304 + H281DRAFT_00781 0.77 +0.1
868,308 + H281DRAFT_00781 0.78 -0.5
868,308 + H281DRAFT_00781 0.78 -1.0
868,309 - H281DRAFT_00781 0.78 -2.7
868,309 - H281DRAFT_00781 0.78 -0.7
868,361 - H281DRAFT_00781 0.83 -1.0

Or see this region's nucleotide sequence