Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00189 and H281DRAFT_00190 are separated by 534 nucleotides H281DRAFT_00190 and H281DRAFT_00191 are separated by 45 nucleotides H281DRAFT_00191 and H281DRAFT_00192 are separated by 151 nucleotides
H281DRAFT_00189: H281DRAFT_00189 - heptosyltransferase-1, at 203,480 to 204,481
_00189
H281DRAFT_00190: H281DRAFT_00190 - hypothetical protein, at 205,016 to 205,153
_00190
H281DRAFT_00191: H281DRAFT_00191 - hypothetical protein, at 205,199 to 205,378
_00191
H281DRAFT_00192: H281DRAFT_00192 - metabolite-proton symporter, at 205,530 to 206,837
_00192
Position (kb) 205
206 Strain fitness (log2 ratio) -1
0
1 at 204.432 kb on + strand at 204.539 kb on + strand at 204.540 kb on - strand at 204.571 kb on + strand at 204.572 kb on - strand at 204.572 kb on - strand at 204.659 kb on + strand at 204.659 kb on + strand at 204.660 kb on - strand at 204.721 kb on + strand at 204.721 kb on + strand at 204.722 kb on - strand at 204.722 kb on - strand at 204.791 kb on + strand at 204.792 kb on - strand at 204.792 kb on - strand at 204.831 kb on + strand at 204.832 kb on - strand at 204.832 kb on - strand at 204.833 kb on + strand at 204.929 kb on - strand at 204.954 kb on + strand at 204.954 kb on + strand at 204.954 kb on + strand at 204.955 kb on - strand at 204.955 kb on - strand at 205.054 kb on - strand, within H281DRAFT_00190 at 205.101 kb on - strand, within H281DRAFT_00190 at 205.104 kb on - strand, within H281DRAFT_00190 at 205.106 kb on + strand, within H281DRAFT_00190 at 205.124 kb on + strand, within H281DRAFT_00190 at 205.124 kb on + strand, within H281DRAFT_00190 at 205.124 kb on + strand, within H281DRAFT_00190 at 205.125 kb on - strand, within H281DRAFT_00190 at 205.125 kb on - strand, within H281DRAFT_00190 at 205.125 kb on - strand, within H281DRAFT_00190 at 205.125 kb on - strand, within H281DRAFT_00190 at 205.143 kb on - strand at 205.143 kb on - strand at 205.143 kb on - strand at 205.143 kb on - strand at 205.143 kb on - strand at 205.146 kb on - strand at 205.146 kb on - strand at 205.152 kb on - strand at 205.234 kb on + strand, within H281DRAFT_00191 at 205.364 kb on + strand at 205.364 kb on + strand at 205.365 kb on - strand at 205.365 kb on - strand at 205.365 kb on - strand at 205.365 kb on - strand at 205.365 kb on - strand at 205.399 kb on + strand at 205.418 kb on + strand at 205.419 kb on - strand at 205.420 kb on + strand at 205.420 kb on + strand at 205.420 kb on + strand at 205.531 kb on + strand at 205.606 kb on + strand at 205.607 kb on - strand at 205.716 kb on - strand, within H281DRAFT_00192 at 206.021 kb on - strand, within H281DRAFT_00192 at 206.048 kb on - strand, within H281DRAFT_00192 at 206.059 kb on + strand, within H281DRAFT_00192 at 206.200 kb on + strand, within H281DRAFT_00192 at 206.200 kb on + strand, within H281DRAFT_00192
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 204,432 + +0.5 204,539 + +0.7 204,540 - -0.5 204,571 + +0.1 204,572 - +1.1 204,572 - -0.1 204,659 + -0.5 204,659 + +0.2 204,660 - +0.4 204,721 + -0.2 204,721 + -0.1 204,722 - +0.2 204,722 - -0.2 204,791 + -0.3 204,792 - +0.3 204,792 - +0.2 204,831 + +0.5 204,832 - +1.0 204,832 - +0.1 204,833 + -0.2 204,929 - -0.1 204,954 + -0.1 204,954 + +0.4 204,954 + -0.1 204,955 - +0.0 204,955 - -0.5 205,054 - H281DRAFT_00190 0.28 -0.3 205,101 - H281DRAFT_00190 0.62 +0.6 205,104 - H281DRAFT_00190 0.64 +0.1 205,106 + H281DRAFT_00190 0.65 -0.4 205,124 + H281DRAFT_00190 0.78 +0.1 205,124 + H281DRAFT_00190 0.78 -0.0 205,124 + H281DRAFT_00190 0.78 -0.5 205,125 - H281DRAFT_00190 0.79 -0.8 205,125 - H281DRAFT_00190 0.79 -1.0 205,125 - H281DRAFT_00190 0.79 -0.9 205,125 - H281DRAFT_00190 0.79 +0.5 205,143 - -0.2 205,143 - -0.2 205,143 - +0.2 205,143 - -0.0 205,143 - -1.2 205,146 - -0.7 205,146 - -0.3 205,152 - +0.0 205,234 + H281DRAFT_00191 0.19 -0.0 205,364 + -0.3 205,364 + +0.2 205,365 - +0.2 205,365 - -0.8 205,365 - +0.6 205,365 - -1.3 205,365 - -0.4 205,399 + -0.1 205,418 + +0.5 205,419 - -0.8 205,420 + +0.5 205,420 + +0.6 205,420 + +0.1 205,531 + +0.1 205,606 + -1.0 205,607 - -0.3 205,716 - H281DRAFT_00192 0.14 +1.6 206,021 - H281DRAFT_00192 0.38 -0.6 206,048 - H281DRAFT_00192 0.40 -0.7 206,059 + H281DRAFT_00192 0.40 +1.1 206,200 + H281DRAFT_00192 0.51 -0.6 206,200 + H281DRAFT_00192 0.51 -0.4
Or see this region's nucleotide sequence