Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06427 and H281DRAFT_06428 are separated by 614 nucleotides H281DRAFT_06428 and H281DRAFT_06429 are separated by 92 nucleotides H281DRAFT_06429 and H281DRAFT_06430 are separated by 55 nucleotides
H281DRAFT_06427: H281DRAFT_06427 - Molecular chaperone IbpA, HSP20 family, at 29,241 to 29,645
_06427
H281DRAFT_06428: H281DRAFT_06428 - hypothetical protein, at 30,260 to 30,385
_06428
H281DRAFT_06429: H281DRAFT_06429 - molybdenum-pterin binding domain-containing protein, at 30,478 to 30,903
_06429
H281DRAFT_06430: H281DRAFT_06430 - hypothetical protein, at 30,959 to 31,102
_06430
Position (kb) 30
31 Strain fitness (log2 ratio) -1
0
1
2 at 29.433 kb on + strand, within H281DRAFT_06427 at 29.434 kb on - strand, within H281DRAFT_06427 at 29.434 kb on - strand, within H281DRAFT_06427 at 29.434 kb on - strand, within H281DRAFT_06427 at 29.627 kb on + strand at 29.627 kb on + strand at 29.628 kb on - strand at 29.749 kb on - strand at 29.761 kb on + strand at 29.761 kb on + strand at 29.762 kb on - strand at 29.852 kb on + strand at 30.078 kb on + strand at 30.079 kb on - strand at 30.079 kb on - strand at 30.167 kb on - strand at 30.381 kb on - strand at 30.394 kb on - strand at 30.397 kb on - strand at 30.417 kb on - strand at 30.423 kb on + strand at 30.423 kb on + strand at 30.594 kb on + strand, within H281DRAFT_06429 at 30.604 kb on - strand, within H281DRAFT_06429 at 30.668 kb on + strand, within H281DRAFT_06429 at 30.701 kb on + strand, within H281DRAFT_06429 at 30.702 kb on - strand, within H281DRAFT_06429 at 30.702 kb on - strand, within H281DRAFT_06429 at 31.080 kb on + strand, within H281DRAFT_06430 at 31.233 kb on + strand at 31.287 kb on - strand at 31.327 kb on - strand at 31.327 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 29,433 + H281DRAFT_06427 0.47 +1.7 29,434 - H281DRAFT_06427 0.48 +0.1 29,434 - H281DRAFT_06427 0.48 +0.7 29,434 - H281DRAFT_06427 0.48 +1.8 29,627 + -0.1 29,627 + -0.3 29,628 - +0.5 29,749 - -0.3 29,761 + +0.4 29,761 + +0.1 29,762 - +0.0 29,852 + -0.9 30,078 + +0.1 30,079 - +0.7 30,079 - -0.4 30,167 - -0.9 30,381 - -0.1 30,394 - -0.2 30,397 - -0.7 30,417 - +0.2 30,423 + +0.4 30,423 + -0.1 30,594 + H281DRAFT_06429 0.27 +0.6 30,604 - H281DRAFT_06429 0.30 -0.2 30,668 + H281DRAFT_06429 0.45 -0.4 30,701 + H281DRAFT_06429 0.52 -0.3 30,702 - H281DRAFT_06429 0.53 -0.2 30,702 - H281DRAFT_06429 0.53 -0.4 31,080 + H281DRAFT_06430 0.84 -0.2 31,233 + -0.3 31,287 - -0.3 31,327 - -0.2 31,327 - +0.2
Or see this region's nucleotide sequence