Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04537 and H281DRAFT_04538 are separated by 31 nucleotides H281DRAFT_04538 and H281DRAFT_04539 overlap by 8 nucleotides H281DRAFT_04539 and H281DRAFT_04540 are separated by 127 nucleotides
H281DRAFT_04537: H281DRAFT_04537 - putative ABC transport system permease protein, at 268,542 to 271,187
_04537
H281DRAFT_04538: H281DRAFT_04538 - hemoglobin, at 271,219 to 271,632
_04538
H281DRAFT_04539: H281DRAFT_04539 - Uncharacterized conserved protein, DUF924 family, at 271,625 to 272,353
_04539
H281DRAFT_04540: H281DRAFT_04540 - 4-amino-4-deoxy-L-arabinose transferase, at 272,481 to 274,304
_04540
Position (kb) 271
272
273 Strain fitness (log2 ratio) -1
0
1 at 270.678 kb on - strand, within H281DRAFT_04537 at 270.861 kb on + strand, within H281DRAFT_04537 at 270.893 kb on + strand, within H281DRAFT_04537 at 271.056 kb on + strand at 271.218 kb on + strand at 271.257 kb on + strand at 271.438 kb on + strand, within H281DRAFT_04538 at 271.438 kb on + strand, within H281DRAFT_04538 at 271.550 kb on + strand, within H281DRAFT_04538 at 271.550 kb on + strand, within H281DRAFT_04538 at 271.550 kb on + strand, within H281DRAFT_04538 at 272.094 kb on - strand, within H281DRAFT_04539 at 272.187 kb on - strand, within H281DRAFT_04539 at 272.190 kb on - strand, within H281DRAFT_04539 at 272.347 kb on + strand at 272.460 kb on + strand at 272.684 kb on - strand, within H281DRAFT_04540 at 272.897 kb on - strand, within H281DRAFT_04540 at 273.102 kb on - strand, within H281DRAFT_04540 at 273.190 kb on + strand, within H281DRAFT_04540 at 273.191 kb on - strand, within H281DRAFT_04540
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 270,678 - H281DRAFT_04537 0.81 +0.7 270,861 + H281DRAFT_04537 0.88 -0.1 270,893 + H281DRAFT_04537 0.89 +1.4 271,056 + -0.3 271,218 + +1.4 271,257 + +0.1 271,438 + H281DRAFT_04538 0.53 +0.4 271,438 + H281DRAFT_04538 0.53 -0.6 271,550 + H281DRAFT_04538 0.80 -0.8 271,550 + H281DRAFT_04538 0.80 +0.4 271,550 + H281DRAFT_04538 0.80 +0.4 272,094 - H281DRAFT_04539 0.64 +1.7 272,187 - H281DRAFT_04539 0.77 -0.3 272,190 - H281DRAFT_04539 0.78 +0.9 272,347 + -0.0 272,460 + +0.1 272,684 - H281DRAFT_04540 0.11 -0.0 272,897 - H281DRAFT_04540 0.23 -0.4 273,102 - H281DRAFT_04540 0.34 +0.3 273,190 + H281DRAFT_04540 0.39 -0.4 273,191 - H281DRAFT_04540 0.39 -0.9
Or see this region's nucleotide sequence