Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03962 and H281DRAFT_03963 are separated by 152 nucleotides H281DRAFT_03963 and H281DRAFT_03964 are separated by 66 nucleotides
H281DRAFT_03962: H281DRAFT_03962 - xanthine dehydrogenase, molybdenum binding subunit apoprotein, at 66,256 to 68,706
_03962
H281DRAFT_03963: H281DRAFT_03963 - molybdenum cofactor sulfurylase, at 68,859 to 69,875
_03963
H281DRAFT_03964: H281DRAFT_03964 - adenosine deaminase, at 69,942 to 70,988
_03964
Position (kb) 68
69
70 Strain fitness (log2 ratio) -1
0
1
2
3 at 68.019 kb on - strand, within H281DRAFT_03962 at 68.104 kb on + strand, within H281DRAFT_03962 at 68.105 kb on - strand, within H281DRAFT_03962 at 68.105 kb on - strand, within H281DRAFT_03962 at 68.325 kb on + strand, within H281DRAFT_03962 at 68.339 kb on + strand, within H281DRAFT_03962 at 68.340 kb on - strand, within H281DRAFT_03962 at 68.386 kb on + strand, within H281DRAFT_03962 at 68.843 kb on + strand at 68.844 kb on - strand at 69.145 kb on + strand, within H281DRAFT_03963 at 69.146 kb on - strand, within H281DRAFT_03963 at 69.200 kb on + strand, within H281DRAFT_03963 at 69.455 kb on - strand, within H281DRAFT_03963 at 69.517 kb on + strand, within H281DRAFT_03963 at 69.573 kb on - strand, within H281DRAFT_03963 at 69.576 kb on + strand, within H281DRAFT_03963 at 69.576 kb on + strand, within H281DRAFT_03963 at 69.577 kb on - strand, within H281DRAFT_03963 at 69.603 kb on - strand, within H281DRAFT_03963 at 69.603 kb on - strand, within H281DRAFT_03963 at 70.007 kb on + strand at 70.111 kb on - strand, within H281DRAFT_03964 at 70.111 kb on - strand, within H281DRAFT_03964 at 70.111 kb on - strand, within H281DRAFT_03964 at 70.146 kb on + strand, within H281DRAFT_03964 at 70.146 kb on + strand, within H281DRAFT_03964 at 70.146 kb on + strand, within H281DRAFT_03964 at 70.147 kb on - strand, within H281DRAFT_03964 at 70.147 kb on - strand, within H281DRAFT_03964 at 70.149 kb on + strand, within H281DRAFT_03964 at 70.188 kb on + strand, within H281DRAFT_03964 at 70.189 kb on - strand, within H281DRAFT_03964 at 70.189 kb on - strand, within H281DRAFT_03964 at 70.206 kb on + strand, within H281DRAFT_03964 at 70.207 kb on - strand, within H281DRAFT_03964 at 70.207 kb on - strand, within H281DRAFT_03964 at 70.207 kb on - strand, within H281DRAFT_03964 at 70.441 kb on - strand, within H281DRAFT_03964 at 70.581 kb on + strand, within H281DRAFT_03964 at 70.582 kb on - strand, within H281DRAFT_03964 at 70.587 kb on + strand, within H281DRAFT_03964 at 70.587 kb on + strand at 70.587 kb on + strand, within H281DRAFT_03964 at 70.821 kb on + strand, within H281DRAFT_03964 at 70.837 kb on - strand, within H281DRAFT_03964 at 70.837 kb on - strand, within H281DRAFT_03964 at 70.837 kb on - strand, within H281DRAFT_03964
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 68,019 - H281DRAFT_03962 0.72 +0.4 68,104 + H281DRAFT_03962 0.75 +0.1 68,105 - H281DRAFT_03962 0.75 +0.2 68,105 - H281DRAFT_03962 0.75 +0.8 68,325 + H281DRAFT_03962 0.84 -0.3 68,339 + H281DRAFT_03962 0.85 +0.6 68,340 - H281DRAFT_03962 0.85 -0.4 68,386 + H281DRAFT_03962 0.87 +0.3 68,843 + +0.4 68,844 - -0.4 69,145 + H281DRAFT_03963 0.28 +1.1 69,146 - H281DRAFT_03963 0.28 +0.2 69,200 + H281DRAFT_03963 0.34 +2.8 69,455 - H281DRAFT_03963 0.59 -0.4 69,517 + H281DRAFT_03963 0.65 +0.1 69,573 - H281DRAFT_03963 0.70 +0.5 69,576 + H281DRAFT_03963 0.71 +1.0 69,576 + H281DRAFT_03963 0.71 +0.4 69,577 - H281DRAFT_03963 0.71 +0.7 69,603 - H281DRAFT_03963 0.73 -0.2 69,603 - H281DRAFT_03963 0.73 -0.4 70,007 + +1.0 70,111 - H281DRAFT_03964 0.16 -0.1 70,111 - H281DRAFT_03964 0.16 -1.0 70,111 - H281DRAFT_03964 0.16 -0.4 70,146 + H281DRAFT_03964 0.19 +0.0 70,146 + H281DRAFT_03964 0.19 -0.1 70,146 + H281DRAFT_03964 0.19 +2.0 70,147 - H281DRAFT_03964 0.20 +0.4 70,147 - H281DRAFT_03964 0.20 +0.6 70,149 + H281DRAFT_03964 0.20 +0.5 70,188 + H281DRAFT_03964 0.23 +0.4 70,189 - H281DRAFT_03964 0.24 -0.3 70,189 - H281DRAFT_03964 0.24 -0.4 70,206 + H281DRAFT_03964 0.25 -0.4 70,207 - H281DRAFT_03964 0.25 +1.2 70,207 - H281DRAFT_03964 0.25 -0.4 70,207 - H281DRAFT_03964 0.25 -0.0 70,441 - H281DRAFT_03964 0.48 -1.0 70,581 + H281DRAFT_03964 0.61 -0.2 70,582 - H281DRAFT_03964 0.61 -0.2 70,587 + H281DRAFT_03964 0.62 +1.0 70,587 + +0.4 70,587 + H281DRAFT_03964 0.62 +0.4 70,821 + H281DRAFT_03964 0.84 -0.4 70,837 - H281DRAFT_03964 0.85 +0.6 70,837 - H281DRAFT_03964 0.85 -0.5 70,837 - H281DRAFT_03964 0.85 -0.2
Or see this region's nucleotide sequence