Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03499 and H281DRAFT_03500 are separated by 114 nucleotides H281DRAFT_03500 and H281DRAFT_03501 overlap by 23 nucleotides H281DRAFT_03501 and H281DRAFT_03502 overlap by 11 nucleotides
H281DRAFT_03499: H281DRAFT_03499 - 2-aminoethylphosphonate transport system substrate-binding protein, at 583,315 to 584,403
_03499
H281DRAFT_03500: H281DRAFT_03500 - 2-aminoethylphosphonate transport system ATP-binding protein, at 584,518 to 585,618
_03500
H281DRAFT_03501: H281DRAFT_03501 - 2-aminoethylphosphonate transport system permease protein, at 585,596 to 586,543
_03501
H281DRAFT_03502: H281DRAFT_03502 - 2-aminoethylphosphonate transport system permease protein, at 586,533 to 587,396
_03502
Position (kb) 584
585
586 Strain fitness (log2 ratio) -1
0
1 at 583.645 kb on + strand, within H281DRAFT_03499 at 583.646 kb on - strand, within H281DRAFT_03499 at 583.724 kb on - strand, within H281DRAFT_03499 at 583.724 kb on - strand, within H281DRAFT_03499 at 584.401 kb on + strand at 584.402 kb on - strand at 584.820 kb on + strand, within H281DRAFT_03500 at 584.851 kb on + strand, within H281DRAFT_03500 at 584.851 kb on + strand, within H281DRAFT_03500 at 584.851 kb on + strand, within H281DRAFT_03500 at 584.916 kb on - strand, within H281DRAFT_03500 at 585.362 kb on - strand, within H281DRAFT_03500 at 585.463 kb on + strand, within H281DRAFT_03500 at 585.463 kb on + strand, within H281DRAFT_03500 at 585.607 kb on - strand at 585.770 kb on + strand, within H281DRAFT_03501 at 586.403 kb on + strand, within H281DRAFT_03501 at 586.484 kb on + strand at 586.485 kb on - strand at 586.494 kb on - strand at 586.518 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 583,645 + H281DRAFT_03499 0.30 -0.4 583,646 - H281DRAFT_03499 0.30 +0.4 583,724 - H281DRAFT_03499 0.38 +1.4 583,724 - H281DRAFT_03499 0.38 -0.7 584,401 + -0.2 584,402 - -0.6 584,820 + H281DRAFT_03500 0.27 +1.2 584,851 + H281DRAFT_03500 0.30 +1.2 584,851 + H281DRAFT_03500 0.30 +0.7 584,851 + H281DRAFT_03500 0.30 -0.6 584,916 - H281DRAFT_03500 0.36 +1.0 585,362 - H281DRAFT_03500 0.77 -0.4 585,463 + H281DRAFT_03500 0.86 +0.7 585,463 + H281DRAFT_03500 0.86 -0.0 585,607 - -0.3 585,770 + H281DRAFT_03501 0.18 +0.2 586,403 + H281DRAFT_03501 0.85 -0.8 586,484 + -0.2 586,485 - +0.2 586,494 - +0.0 586,518 + +0.7
Or see this region's nucleotide sequence