Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02745 and H281DRAFT_02746 are separated by 51 nucleotides H281DRAFT_02746 and H281DRAFT_02747 are separated by 312 nucleotides H281DRAFT_02747 and H281DRAFT_02748 are separated by 86 nucleotides
H281DRAFT_02745: H281DRAFT_02745 - Pimeloyl-ACP methyl ester carboxylesterase, at 329,799 to 330,608
_02745
H281DRAFT_02746: H281DRAFT_02746 - Nicotinamidase-related amidase, at 330,660 to 331,340
_02746
H281DRAFT_02747: H281DRAFT_02747 - hypothetical protein, at 331,653 to 332,063
_02747
H281DRAFT_02748: H281DRAFT_02748 - Head domain of trimeric autotransporter adhesin, at 332,150 to 336,334
_02748
Position (kb) 330
331
332 Strain fitness (log2 ratio) -1
0
1
2 at 330.129 kb on + strand, within H281DRAFT_02745 at 330.868 kb on - strand, within H281DRAFT_02746 at 330.935 kb on + strand, within H281DRAFT_02746 at 330.936 kb on - strand, within H281DRAFT_02746 at 330.936 kb on - strand, within H281DRAFT_02746 at 331.134 kb on - strand, within H281DRAFT_02746 at 331.505 kb on + strand at 331.837 kb on - strand, within H281DRAFT_02747 at 332.030 kb on + strand at 332.076 kb on + strand at 332.084 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 330,129 + H281DRAFT_02745 0.41 +0.4 330,868 - H281DRAFT_02746 0.31 +0.1 330,935 + H281DRAFT_02746 0.40 +0.2 330,936 - H281DRAFT_02746 0.41 -1.3 330,936 - H281DRAFT_02746 0.41 +0.7 331,134 - H281DRAFT_02746 0.70 -0.8 331,505 + -0.2 331,837 - H281DRAFT_02747 0.45 +0.5 332,030 + +1.9 332,076 + +0.4 332,084 - -0.3
Or see this region's nucleotide sequence