Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02725 and H281DRAFT_02726 overlap by 11 nucleotides H281DRAFT_02726 and H281DRAFT_02727 are separated by 176 nucleotides
H281DRAFT_02725: H281DRAFT_02725 - MFS transporter, MHS family, proline/betaine transporter, at 310,389 to 311,678
_02725
H281DRAFT_02726: H281DRAFT_02726 - Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase, at 311,668 to 313,116
_02726
H281DRAFT_02727: H281DRAFT_02727 - transcriptional regulator, LysR family, at 313,293 to 314,216
_02727
Position (kb) 311
312
313
314 Strain fitness (log2 ratio) -1
0
1 at 310.759 kb on - strand, within H281DRAFT_02725 at 310.880 kb on - strand, within H281DRAFT_02725 at 310.890 kb on - strand, within H281DRAFT_02725 at 310.891 kb on + strand, within H281DRAFT_02725 at 310.891 kb on + strand, within H281DRAFT_02725 at 310.892 kb on - strand, within H281DRAFT_02725 at 310.892 kb on - strand, within H281DRAFT_02725 at 310.903 kb on + strand, within H281DRAFT_02725 at 310.904 kb on - strand, within H281DRAFT_02725 at 311.422 kb on + strand, within H281DRAFT_02725 at 311.487 kb on - strand, within H281DRAFT_02725 at 311.551 kb on + strand at 311.552 kb on - strand at 311.557 kb on + strand at 311.557 kb on + strand at 311.672 kb on + strand at 311.672 kb on + strand at 311.673 kb on - strand at 312.365 kb on - strand, within H281DRAFT_02726 at 312.496 kb on + strand, within H281DRAFT_02726 at 312.846 kb on - strand, within H281DRAFT_02726 at 313.026 kb on + strand at 313.104 kb on + strand at 313.104 kb on + strand at 313.231 kb on - strand at 313.314 kb on + strand at 313.315 kb on - strand at 313.459 kb on + strand, within H281DRAFT_02727 at 313.727 kb on - strand, within H281DRAFT_02727 at 313.959 kb on + strand, within H281DRAFT_02727 at 313.960 kb on - strand, within H281DRAFT_02727
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 310,759 - H281DRAFT_02725 0.29 -0.6 310,880 - H281DRAFT_02725 0.38 +0.4 310,890 - H281DRAFT_02725 0.39 +0.5 310,891 + H281DRAFT_02725 0.39 -0.9 310,891 + H281DRAFT_02725 0.39 -0.4 310,892 - H281DRAFT_02725 0.39 -0.5 310,892 - H281DRAFT_02725 0.39 -0.2 310,903 + H281DRAFT_02725 0.40 +0.3 310,904 - H281DRAFT_02725 0.40 -0.2 311,422 + H281DRAFT_02725 0.80 +0.4 311,487 - H281DRAFT_02725 0.85 +0.8 311,551 + -0.5 311,552 - -1.2 311,557 + -0.3 311,557 + -0.6 311,672 + -0.7 311,672 + +1.1 311,673 - +0.2 312,365 - H281DRAFT_02726 0.48 -0.8 312,496 + H281DRAFT_02726 0.57 +0.0 312,846 - H281DRAFT_02726 0.81 -0.1 313,026 + +0.4 313,104 + -0.5 313,104 + +0.3 313,231 - -0.6 313,314 + -1.1 313,315 - +0.7 313,459 + H281DRAFT_02727 0.18 +0.2 313,727 - H281DRAFT_02727 0.47 +0.2 313,959 + H281DRAFT_02727 0.72 +0.2 313,960 - H281DRAFT_02727 0.72 +1.1
Or see this region's nucleotide sequence