Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02684 and H281DRAFT_02685 are separated by 177 nucleotides H281DRAFT_02685 and H281DRAFT_02686 are separated by 253 nucleotides
H281DRAFT_02684: H281DRAFT_02684 - methyl-accepting chemotaxis sensory transducer with TarH sensor, at 267,038 to 268,582
_02684
H281DRAFT_02685: H281DRAFT_02685 - Uncharacterized damage-inducible protein DinB (forms a four-helix bundle), at 268,760 to 269,278
_02685
H281DRAFT_02686: H281DRAFT_02686 - transcriptional regulator, LysR family, at 269,532 to 270,434
_02686
Position (kb) 268
269
270 Strain fitness (log2 ratio) -1
0
1
2 at 267.817 kb on + strand, within H281DRAFT_02684 at 268.027 kb on + strand, within H281DRAFT_02684 at 268.373 kb on - strand, within H281DRAFT_02684 at 268.600 kb on + strand at 268.819 kb on - strand, within H281DRAFT_02685 at 268.913 kb on + strand, within H281DRAFT_02685 at 268.914 kb on - strand, within H281DRAFT_02685 at 269.417 kb on + strand at 269.418 kb on - strand at 269.512 kb on + strand at 269.683 kb on + strand, within H281DRAFT_02686 at 269.710 kb on + strand, within H281DRAFT_02686 at 269.710 kb on + strand, within H281DRAFT_02686 at 269.710 kb on + strand, within H281DRAFT_02686 at 269.711 kb on - strand, within H281DRAFT_02686 at 269.830 kb on - strand, within H281DRAFT_02686
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 267,817 + H281DRAFT_02684 0.50 -0.7 268,027 + H281DRAFT_02684 0.64 +0.4 268,373 - H281DRAFT_02684 0.86 +0.3 268,600 + -0.8 268,819 - H281DRAFT_02685 0.11 -0.2 268,913 + H281DRAFT_02685 0.29 +0.2 268,914 - H281DRAFT_02685 0.30 +1.9 269,417 + +1.5 269,418 - +0.4 269,512 + -0.7 269,683 + H281DRAFT_02686 0.17 +0.0 269,710 + H281DRAFT_02686 0.20 -0.3 269,710 + H281DRAFT_02686 0.20 -0.5 269,710 + H281DRAFT_02686 0.20 -0.3 269,711 - H281DRAFT_02686 0.20 +0.0 269,830 - H281DRAFT_02686 0.33 +0.5
Or see this region's nucleotide sequence