Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02421 and H281DRAFT_02422 are separated by 12 nucleotides H281DRAFT_02422 and H281DRAFT_02423 overlap by 4 nucleotides H281DRAFT_02423 and H281DRAFT_02424 overlap by 22 nucleotides
H281DRAFT_02421: H281DRAFT_02421 - sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family, at 594,083 to 594,727
_02421
H281DRAFT_02422: H281DRAFT_02422 - hypothetical protein, at 594,740 to 594,979
_02422
H281DRAFT_02423: H281DRAFT_02423 - Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II, at 594,976 to 596,379
_02423
H281DRAFT_02424: H281DRAFT_02424 - Phenylacetate-coenzyme A ligase PaaK, adenylate-forming domain family, at 596,358 to 597,440
_02424
Position (kb) 594
595
596
597 Strain fitness (log2 ratio) -2
-1
0
1
2 at 594.086 kb on + strand at 594.086 kb on + strand at 594.087 kb on - strand at 594.203 kb on + strand, within H281DRAFT_02421 at 594.203 kb on + strand, within H281DRAFT_02421 at 594.216 kb on + strand, within H281DRAFT_02421 at 594.313 kb on + strand, within H281DRAFT_02421 at 594.382 kb on - strand, within H281DRAFT_02421 at 594.382 kb on - strand, within H281DRAFT_02421 at 594.382 kb on - strand, within H281DRAFT_02421 at 594.563 kb on + strand, within H281DRAFT_02421 at 594.563 kb on + strand, within H281DRAFT_02421 at 594.564 kb on - strand, within H281DRAFT_02421 at 594.564 kb on - strand, within H281DRAFT_02421 at 594.642 kb on - strand, within H281DRAFT_02421 at 594.700 kb on + strand at 594.701 kb on - strand at 594.754 kb on + strand at 594.758 kb on + strand at 594.758 kb on + strand at 594.758 kb on + strand at 594.758 kb on + strand at 594.821 kb on + strand, within H281DRAFT_02422 at 594.821 kb on + strand, within H281DRAFT_02422 at 594.822 kb on - strand, within H281DRAFT_02422 at 594.883 kb on + strand, within H281DRAFT_02422 at 594.969 kb on + strand at 594.969 kb on + strand at 594.969 kb on + strand at 594.969 kb on + strand at 594.975 kb on + strand at 594.975 kb on + strand at 594.976 kb on - strand at 594.976 kb on - strand at 594.976 kb on - strand at 595.004 kb on - strand at 595.052 kb on - strand at 595.052 kb on - strand at 595.117 kb on - strand, within H281DRAFT_02423 at 595.240 kb on + strand, within H281DRAFT_02423 at 595.240 kb on + strand, within H281DRAFT_02423 at 595.240 kb on + strand, within H281DRAFT_02423 at 595.241 kb on - strand, within H281DRAFT_02423 at 595.241 kb on - strand, within H281DRAFT_02423 at 595.241 kb on - strand, within H281DRAFT_02423 at 595.253 kb on - strand, within H281DRAFT_02423 at 595.279 kb on + strand, within H281DRAFT_02423 at 595.309 kb on + strand, within H281DRAFT_02423 at 595.459 kb on + strand, within H281DRAFT_02423 at 595.459 kb on + strand, within H281DRAFT_02423 at 595.459 kb on + strand, within H281DRAFT_02423 at 595.460 kb on - strand, within H281DRAFT_02423 at 595.511 kb on - strand, within H281DRAFT_02423 at 595.511 kb on - strand, within H281DRAFT_02423 at 595.511 kb on - strand, within H281DRAFT_02423 at 595.516 kb on + strand, within H281DRAFT_02423 at 595.651 kb on - strand, within H281DRAFT_02423 at 595.651 kb on - strand, within H281DRAFT_02423 at 595.655 kb on - strand, within H281DRAFT_02423 at 595.655 kb on - strand, within H281DRAFT_02423 at 595.655 kb on - strand, within H281DRAFT_02423 at 595.655 kb on - strand, within H281DRAFT_02423 at 595.802 kb on - strand, within H281DRAFT_02423 at 595.802 kb on - strand, within H281DRAFT_02423 at 595.834 kb on + strand, within H281DRAFT_02423 at 596.197 kb on - strand, within H281DRAFT_02423 at 596.222 kb on + strand, within H281DRAFT_02423 at 596.223 kb on - strand, within H281DRAFT_02423 at 596.353 kb on + strand at 596.354 kb on - strand at 596.473 kb on - strand, within H281DRAFT_02424 at 596.473 kb on - strand, within H281DRAFT_02424 at 596.473 kb on - strand, within H281DRAFT_02424 at 596.851 kb on - strand, within H281DRAFT_02424 at 596.942 kb on + strand, within H281DRAFT_02424 at 596.942 kb on + strand, within H281DRAFT_02424 at 596.943 kb on - strand, within H281DRAFT_02424 at 597.124 kb on - strand, within H281DRAFT_02424 at 597.124 kb on - strand, within H281DRAFT_02424 at 597.126 kb on + strand, within H281DRAFT_02424 at 597.127 kb on - strand, within H281DRAFT_02424 at 597.127 kb on - strand, within H281DRAFT_02424 at 597.127 kb on - strand, within H281DRAFT_02424 at 597.372 kb on + strand at 597.372 kb on + strand at 597.373 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 594,086 + +0.5 594,086 + -0.2 594,087 - +0.2 594,203 + H281DRAFT_02421 0.19 +0.1 594,203 + H281DRAFT_02421 0.19 -0.2 594,216 + H281DRAFT_02421 0.21 -0.3 594,313 + H281DRAFT_02421 0.36 -0.3 594,382 - H281DRAFT_02421 0.46 +0.5 594,382 - H281DRAFT_02421 0.46 +0.4 594,382 - H281DRAFT_02421 0.46 -0.1 594,563 + H281DRAFT_02421 0.74 +0.5 594,563 + H281DRAFT_02421 0.74 +0.1 594,564 - H281DRAFT_02421 0.75 +0.5 594,564 - H281DRAFT_02421 0.75 +0.3 594,642 - H281DRAFT_02421 0.87 +0.7 594,700 + +0.1 594,701 - +0.3 594,754 + +0.8 594,758 + +0.5 594,758 + -0.1 594,758 + +0.8 594,758 + +0.8 594,821 + H281DRAFT_02422 0.34 +1.1 594,821 + H281DRAFT_02422 0.34 +0.3 594,822 - H281DRAFT_02422 0.34 -0.7 594,883 + H281DRAFT_02422 0.60 +0.2 594,969 + +1.4 594,969 + -2.4 594,969 + +0.7 594,969 + +0.0 594,975 + +1.3 594,975 + +0.2 594,976 - +0.4 594,976 - +0.0 594,976 - +0.3 595,004 - +0.7 595,052 - +0.9 595,052 - +0.6 595,117 - H281DRAFT_02423 0.10 +0.9 595,240 + H281DRAFT_02423 0.19 +1.4 595,240 + H281DRAFT_02423 0.19 -0.0 595,240 + H281DRAFT_02423 0.19 +0.7 595,241 - H281DRAFT_02423 0.19 +0.7 595,241 - H281DRAFT_02423 0.19 +0.7 595,241 - H281DRAFT_02423 0.19 +1.4 595,253 - H281DRAFT_02423 0.20 +1.0 595,279 + H281DRAFT_02423 0.22 +0.9 595,309 + H281DRAFT_02423 0.24 +1.2 595,459 + H281DRAFT_02423 0.34 +0.4 595,459 + H281DRAFT_02423 0.34 +0.4 595,459 + H281DRAFT_02423 0.34 -0.2 595,460 - H281DRAFT_02423 0.34 +1.0 595,511 - H281DRAFT_02423 0.38 +1.3 595,511 - H281DRAFT_02423 0.38 +0.5 595,511 - H281DRAFT_02423 0.38 +2.3 595,516 + H281DRAFT_02423 0.38 +1.3 595,651 - H281DRAFT_02423 0.48 -0.4 595,651 - H281DRAFT_02423 0.48 +1.5 595,655 - H281DRAFT_02423 0.48 +0.7 595,655 - H281DRAFT_02423 0.48 -0.0 595,655 - H281DRAFT_02423 0.48 +0.7 595,655 - H281DRAFT_02423 0.48 +0.8 595,802 - H281DRAFT_02423 0.59 +0.2 595,802 - H281DRAFT_02423 0.59 +1.0 595,834 + H281DRAFT_02423 0.61 +0.6 596,197 - H281DRAFT_02423 0.87 +0.5 596,222 + H281DRAFT_02423 0.89 +0.7 596,223 - H281DRAFT_02423 0.89 +0.6 596,353 + +0.5 596,354 - +0.1 596,473 - H281DRAFT_02424 0.11 +0.5 596,473 - H281DRAFT_02424 0.11 -0.0 596,473 - H281DRAFT_02424 0.11 +0.2 596,851 - H281DRAFT_02424 0.46 +1.4 596,942 + H281DRAFT_02424 0.54 -0.3 596,942 + H281DRAFT_02424 0.54 +0.3 596,943 - H281DRAFT_02424 0.54 +0.8 597,124 - H281DRAFT_02424 0.71 +0.1 597,124 - H281DRAFT_02424 0.71 -0.2 597,126 + H281DRAFT_02424 0.71 -0.2 597,127 - H281DRAFT_02424 0.71 +0.8 597,127 - H281DRAFT_02424 0.71 +0.7 597,127 - H281DRAFT_02424 0.71 -0.1 597,372 + +0.8 597,372 + +0.5 597,373 - +0.4
Or see this region's nucleotide sequence