Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02177 and H281DRAFT_02178 are separated by 417 nucleotides H281DRAFT_02178 and H281DRAFT_02179 are separated by 10 nucleotides H281DRAFT_02179 and H281DRAFT_02180 are separated by 194 nucleotides
H281DRAFT_02177: H281DRAFT_02177 - ferredoxin--NADP+ reductase, at 318,846 to 319,616
_02177
H281DRAFT_02178: H281DRAFT_02178 - Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, at 320,034 to 320,894
_02178
H281DRAFT_02179: H281DRAFT_02179 - two component transcriptional regulator, LuxR family, at 320,905 to 321,561
_02179
H281DRAFT_02180: H281DRAFT_02180 - amino acid/polyamine/organocation transporter, APC superfamily, at 321,756 to 323,147
_02180
Position (kb) 320
321 Strain fitness (log2 ratio) -1
0
1
2 at 319.711 kb on + strand at 319.711 kb on + strand at 319.729 kb on + strand at 319.812 kb on - strand at 319.816 kb on + strand at 319.816 kb on + strand at 319.875 kb on - strand at 319.951 kb on - strand at 319.962 kb on - strand at 320.039 kb on + strand at 320.039 kb on + strand at 320.040 kb on - strand at 320.040 kb on - strand at 320.040 kb on - strand at 320.040 kb on - strand at 320.059 kb on + strand at 320.606 kb on - strand, within H281DRAFT_02178 at 320.606 kb on - strand, within H281DRAFT_02178 at 320.641 kb on + strand, within H281DRAFT_02178 at 320.790 kb on - strand, within H281DRAFT_02178 at 320.790 kb on - strand, within H281DRAFT_02178 at 320.790 kb on - strand, within H281DRAFT_02178 at 320.966 kb on + strand at 320.966 kb on + strand at 320.967 kb on - strand at 321.049 kb on + strand, within H281DRAFT_02179 at 321.049 kb on + strand, within H281DRAFT_02179 at 321.050 kb on - strand, within H281DRAFT_02179 at 321.050 kb on - strand at 321.101 kb on + strand, within H281DRAFT_02179 at 321.101 kb on + strand, within H281DRAFT_02179 at 321.102 kb on - strand, within H281DRAFT_02179 at 321.157 kb on + strand, within H281DRAFT_02179 at 321.158 kb on - strand, within H281DRAFT_02179 at 321.172 kb on + strand, within H281DRAFT_02179 at 321.172 kb on + strand, within H281DRAFT_02179 at 321.173 kb on - strand, within H281DRAFT_02179 at 321.277 kb on + strand, within H281DRAFT_02179 at 321.277 kb on + strand, within H281DRAFT_02179 at 321.277 kb on + strand, within H281DRAFT_02179 at 321.277 kb on + strand, within H281DRAFT_02179 at 321.277 kb on + strand, within H281DRAFT_02179 at 321.277 kb on + strand, within H281DRAFT_02179 at 321.277 kb on + strand, within H281DRAFT_02179 at 321.278 kb on - strand, within H281DRAFT_02179 at 321.278 kb on - strand, within H281DRAFT_02179 at 321.278 kb on - strand, within H281DRAFT_02179 at 321.313 kb on + strand, within H281DRAFT_02179 at 321.313 kb on + strand, within H281DRAFT_02179 at 321.313 kb on + strand, within H281DRAFT_02179 at 321.313 kb on + strand, within H281DRAFT_02179 at 321.314 kb on - strand, within H281DRAFT_02179 at 321.368 kb on - strand, within H281DRAFT_02179 at 321.454 kb on + strand, within H281DRAFT_02179 at 321.512 kb on - strand at 321.512 kb on - strand at 321.512 kb on - strand at 321.630 kb on + strand at 321.630 kb on + strand at 321.631 kb on - strand at 321.654 kb on + strand at 321.739 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 319,711 + -0.7 319,711 + -0.7 319,729 + -1.7 319,812 - +0.1 319,816 + -0.8 319,816 + -1.5 319,875 - +1.3 319,951 - +1.8 319,962 - +1.6 320,039 + +1.4 320,039 + +1.2 320,040 - +0.8 320,040 - +1.5 320,040 - +1.4 320,040 - +0.9 320,059 + +1.6 320,606 - H281DRAFT_02178 0.66 +0.8 320,606 - H281DRAFT_02178 0.66 +1.8 320,641 + H281DRAFT_02178 0.70 +1.3 320,790 - H281DRAFT_02178 0.88 +1.1 320,790 - H281DRAFT_02178 0.88 +1.2 320,790 - H281DRAFT_02178 0.88 +1.3 320,966 + +1.6 320,966 + +1.2 320,967 - +1.5 321,049 + H281DRAFT_02179 0.22 +1.2 321,049 + H281DRAFT_02179 0.22 +2.2 321,050 - H281DRAFT_02179 0.22 +0.7 321,050 - +0.9 321,101 + H281DRAFT_02179 0.30 +1.7 321,101 + H281DRAFT_02179 0.30 +1.5 321,102 - H281DRAFT_02179 0.30 +1.1 321,157 + H281DRAFT_02179 0.38 +1.7 321,158 - H281DRAFT_02179 0.39 +0.6 321,172 + H281DRAFT_02179 0.41 +1.3 321,172 + H281DRAFT_02179 0.41 +1.2 321,173 - H281DRAFT_02179 0.41 +1.2 321,277 + H281DRAFT_02179 0.57 +0.5 321,277 + H281DRAFT_02179 0.57 +1.2 321,277 + H281DRAFT_02179 0.57 +0.9 321,277 + H281DRAFT_02179 0.57 +1.3 321,277 + H281DRAFT_02179 0.57 +1.2 321,277 + H281DRAFT_02179 0.57 +0.9 321,277 + H281DRAFT_02179 0.57 +1.0 321,278 - H281DRAFT_02179 0.57 +2.2 321,278 - H281DRAFT_02179 0.57 -0.5 321,278 - H281DRAFT_02179 0.57 +0.8 321,313 + H281DRAFT_02179 0.62 +0.9 321,313 + H281DRAFT_02179 0.62 +1.1 321,313 + H281DRAFT_02179 0.62 +1.5 321,313 + H281DRAFT_02179 0.62 +0.9 321,314 - H281DRAFT_02179 0.62 +1.0 321,368 - H281DRAFT_02179 0.70 +0.9 321,454 + H281DRAFT_02179 0.84 +1.1 321,512 - +0.6 321,512 - +1.1 321,512 - +0.7 321,630 + -0.5 321,630 + -0.4 321,631 - +1.2 321,654 + -0.0 321,739 - -0.1
Or see this region's nucleotide sequence