Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01766 and H281DRAFT_01767 are separated by 292 nucleotides H281DRAFT_01767 and H281DRAFT_01768 are separated by 40 nucleotides
H281DRAFT_01766: H281DRAFT_01766 - cytochrome c oxidase subunit 2, at 661,767 to 662,825
_01766
H281DRAFT_01767: H281DRAFT_01767 - hypothetical protein, at 663,118 to 663,264
_01767
H281DRAFT_01768: H281DRAFT_01768 - two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ, at 663,305 to 664,549
_01768
Position (kb) 663
664 Strain fitness (log2 ratio) -1
0
1 at 662.130 kb on - strand at 662.197 kb on - strand, within H281DRAFT_01766 at 662.467 kb on + strand, within H281DRAFT_01766 at 662.868 kb on + strand at 662.870 kb on + strand at 662.876 kb on + strand at 662.876 kb on + strand at 662.877 kb on - strand at 663.220 kb on - strand, within H281DRAFT_01767 at 663.333 kb on + strand at 663.732 kb on + strand, within H281DRAFT_01768 at 663.733 kb on - strand, within H281DRAFT_01768 at 663.954 kb on + strand, within H281DRAFT_01768 at 663.954 kb on + strand, within H281DRAFT_01768 at 663.954 kb on + strand, within H281DRAFT_01768 at 663.954 kb on + strand, within H281DRAFT_01768 at 663.955 kb on - strand, within H281DRAFT_01768 at 664.016 kb on - strand, within H281DRAFT_01768
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 662,130 - +0.2 662,197 - H281DRAFT_01766 0.41 +0.6 662,467 + H281DRAFT_01766 0.66 +0.6 662,868 + -0.1 662,870 + +0.2 662,876 + -0.3 662,876 + -0.2 662,877 - +0.7 663,220 - H281DRAFT_01767 0.69 +0.6 663,333 + -0.0 663,732 + H281DRAFT_01768 0.34 -1.1 663,733 - H281DRAFT_01768 0.34 +0.1 663,954 + H281DRAFT_01768 0.52 -0.2 663,954 + H281DRAFT_01768 0.52 +0.5 663,954 + H281DRAFT_01768 0.52 +0.3 663,954 + H281DRAFT_01768 0.52 +0.5 663,955 - H281DRAFT_01768 0.52 -0.1 664,016 - H281DRAFT_01768 0.57 -0.1
Or see this region's nucleotide sequence