Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01568 and H281DRAFT_01569 are separated by 333 nucleotides H281DRAFT_01569 and H281DRAFT_01570 are separated by 28 nucleotides H281DRAFT_01570 and H281DRAFT_01571 are separated by 137 nucleotides
H281DRAFT_01568: H281DRAFT_01568 - D-serine ammonia-lyase, at 443,128 to 444,489
_01568
H281DRAFT_01569: H281DRAFT_01569 - hypothetical protein, at 444,823 to 445,017
_01569
H281DRAFT_01570: H281DRAFT_01570 - luciferase-type oxidoreductase, BA3436 family, at 445,046 to 446,017
_01570
H281DRAFT_01571: H281DRAFT_01571 - Nucleoside-diphosphate-sugar epimerase, at 446,155 to 447,198
_01571
Position (kb) 445
446
447 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 444.221 kb on - strand, within H281DRAFT_01568 at 444.735 kb on + strand at 444.735 kb on + strand at 444.736 kb on - strand at 444.787 kb on + strand at 444.787 kb on + strand at 445.052 kb on - strand at 445.169 kb on - strand, within H281DRAFT_01570 at 445.374 kb on + strand, within H281DRAFT_01570 at 445.514 kb on + strand, within H281DRAFT_01570 at 445.799 kb on + strand, within H281DRAFT_01570 at 445.800 kb on - strand, within H281DRAFT_01570 at 446.328 kb on - strand, within H281DRAFT_01571 at 446.511 kb on + strand, within H281DRAFT_01571 at 446.511 kb on + strand, within H281DRAFT_01571 at 446.764 kb on + strand, within H281DRAFT_01571
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 444,221 - H281DRAFT_01568 0.80 -0.2 444,735 + +0.0 444,735 + -0.7 444,736 - +0.7 444,787 + +0.4 444,787 + -0.8 445,052 - -0.9 445,169 - H281DRAFT_01570 0.13 -0.2 445,374 + H281DRAFT_01570 0.34 -0.1 445,514 + H281DRAFT_01570 0.48 +4.4 445,799 + H281DRAFT_01570 0.77 -0.1 445,800 - H281DRAFT_01570 0.78 -0.2 446,328 - H281DRAFT_01571 0.17 +0.2 446,511 + H281DRAFT_01571 0.34 -0.3 446,511 + H281DRAFT_01571 0.34 -0.9 446,764 + H281DRAFT_01571 0.58 +0.1
Or see this region's nucleotide sequence