Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01493 and H281DRAFT_01494 are separated by 73 nucleotides H281DRAFT_01494 and H281DRAFT_01495 are separated by 185 nucleotides
H281DRAFT_01493: H281DRAFT_01493 - aspartate carbamoyltransferase, at 362,841 to 364,133
_01493
H281DRAFT_01494: H281DRAFT_01494 - S-formylglutathione hydrolase FrmB, at 364,207 to 365,049
_01494
H281DRAFT_01495: H281DRAFT_01495 - NAD(P)H dehydrogenase (quinone), at 365,235 to 366,011
_01495
Position (kb) 364
365
366 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 363.254 kb on + strand, within H281DRAFT_01493 at 363.255 kb on - strand, within H281DRAFT_01493 at 364.243 kb on - strand at 364.416 kb on + strand, within H281DRAFT_01494 at 364.746 kb on + strand, within H281DRAFT_01494 at 364.747 kb on - strand, within H281DRAFT_01494 at 364.869 kb on - strand, within H281DRAFT_01494 at 364.908 kb on - strand, within H281DRAFT_01494 at 365.018 kb on - strand at 365.018 kb on - strand at 365.068 kb on + strand at 365.068 kb on + strand at 365.068 kb on + strand at 365.069 kb on - strand at 365.140 kb on + strand at 365.140 kb on + strand at 365.154 kb on + strand at 365.155 kb on - strand at 365.236 kb on + strand at 365.292 kb on - strand at 365.292 kb on - strand at 365.449 kb on - strand, within H281DRAFT_01495 at 365.468 kb on - strand, within H281DRAFT_01495 at 365.472 kb on + strand, within H281DRAFT_01495 at 365.473 kb on - strand, within H281DRAFT_01495 at 365.532 kb on - strand, within H281DRAFT_01495 at 365.657 kb on - strand, within H281DRAFT_01495 at 365.663 kb on - strand, within H281DRAFT_01495 at 365.993 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 363,254 + H281DRAFT_01493 0.32 -0.4 363,255 - H281DRAFT_01493 0.32 -2.2 364,243 - +0.1 364,416 + H281DRAFT_01494 0.25 -1.9 364,746 + H281DRAFT_01494 0.64 +0.4 364,747 - H281DRAFT_01494 0.64 +0.8 364,869 - H281DRAFT_01494 0.79 +3.4 364,908 - H281DRAFT_01494 0.83 +0.5 365,018 - +0.5 365,018 - +0.5 365,068 + +0.9 365,068 + -0.1 365,068 + -0.3 365,069 - +0.2 365,140 + +0.2 365,140 + -0.6 365,154 + -0.4 365,155 - -0.6 365,236 + +0.9 365,292 - +4.2 365,292 - +0.0 365,449 - H281DRAFT_01495 0.28 +0.0 365,468 - H281DRAFT_01495 0.30 +0.3 365,472 + H281DRAFT_01495 0.31 +0.3 365,473 - H281DRAFT_01495 0.31 +0.6 365,532 - H281DRAFT_01495 0.38 -0.0 365,657 - H281DRAFT_01495 0.54 +0.1 365,663 - H281DRAFT_01495 0.55 -0.6 365,993 - +0.2
Or see this region's nucleotide sequence