Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01209 and H281DRAFT_01210 are separated by 30 nucleotides H281DRAFT_01210 and H281DRAFT_01211 are separated by 397 nucleotides
H281DRAFT_01209: H281DRAFT_01209 - putative MFS transporter, AGZA family, xanthine/uracil permease, at 48,541 to 49,842
_01209
H281DRAFT_01210: H281DRAFT_01210 - Protein of unknown function (DUF1488), at 49,873 to 50,163
_01210
H281DRAFT_01211: H281DRAFT_01211 - Transcriptional regulator of acetoin/glycerol metabolism, at 50,561 to 52,537
_01211
Position (kb) 49
50
51 Strain fitness (log2 ratio) -1
0
1 at 48.939 kb on - strand, within H281DRAFT_01209 at 49.005 kb on - strand, within H281DRAFT_01209 at 49.050 kb on + strand, within H281DRAFT_01209 at 49.096 kb on - strand, within H281DRAFT_01209 at 49.105 kb on + strand, within H281DRAFT_01209 at 49.109 kb on + strand, within H281DRAFT_01209 at 49.110 kb on - strand, within H281DRAFT_01209 at 49.110 kb on - strand, within H281DRAFT_01209 at 49.257 kb on + strand, within H281DRAFT_01209 at 49.274 kb on + strand, within H281DRAFT_01209 at 49.274 kb on + strand, within H281DRAFT_01209 at 49.451 kb on - strand at 49.594 kb on + strand, within H281DRAFT_01209 at 49.697 kb on - strand, within H281DRAFT_01209 at 49.735 kb on + strand at 49.735 kb on + strand at 49.735 kb on + strand at 49.826 kb on - strand at 49.826 kb on - strand at 49.826 kb on - strand at 49.829 kb on + strand at 49.830 kb on - strand at 49.830 kb on - strand at 49.896 kb on - strand at 49.907 kb on + strand, within H281DRAFT_01210 at 50.129 kb on + strand, within H281DRAFT_01210 at 50.130 kb on - strand, within H281DRAFT_01210 at 50.261 kb on - strand at 50.261 kb on - strand at 50.470 kb on - strand at 50.470 kb on - strand at 50.531 kb on - strand at 50.726 kb on + strand at 50.728 kb on + strand at 50.989 kb on + strand, within H281DRAFT_01211
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 48,939 - H281DRAFT_01209 0.31 +0.1 49,005 - H281DRAFT_01209 0.36 +0.8 49,050 + H281DRAFT_01209 0.39 -0.4 49,096 - H281DRAFT_01209 0.43 +1.0 49,105 + H281DRAFT_01209 0.43 +0.2 49,109 + H281DRAFT_01209 0.44 -0.6 49,110 - H281DRAFT_01209 0.44 -0.5 49,110 - H281DRAFT_01209 0.44 -1.1 49,257 + H281DRAFT_01209 0.55 -0.0 49,274 + H281DRAFT_01209 0.56 -1.0 49,274 + H281DRAFT_01209 0.56 +0.3 49,451 - +0.7 49,594 + H281DRAFT_01209 0.81 +1.4 49,697 - H281DRAFT_01209 0.89 -1.0 49,735 + -0.0 49,735 + +0.3 49,735 + -0.4 49,826 - -0.5 49,826 - -0.5 49,826 - +0.2 49,829 + -0.6 49,830 - +0.7 49,830 - -0.4 49,896 - +0.4 49,907 + H281DRAFT_01210 0.12 +0.9 50,129 + H281DRAFT_01210 0.88 -0.2 50,130 - H281DRAFT_01210 0.88 +0.7 50,261 - +0.4 50,261 - +0.5 50,470 - -0.1 50,470 - +0.1 50,531 - -0.2 50,726 + +0.1 50,728 + -0.2 50,989 + H281DRAFT_01211 0.22 +0.1
Or see this region's nucleotide sequence