Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00468 and H281DRAFT_00469 are separated by 341 nucleotides H281DRAFT_00469 and H281DRAFT_00470 are separated by 771 nucleotides
H281DRAFT_00468: H281DRAFT_00468 - dihydrolipoamide dehydrogenase, at 525,855 to 527,627
_00468
H281DRAFT_00469: H281DRAFT_00469 - phasin family protein, at 527,969 to 528,541
_00469
H281DRAFT_00470: H281DRAFT_00470 - murein-DD-endopeptidase. Serine peptidase. MEROPS family S11, at 529,313 to 530,494
_00470
Position (kb) 527
528
529 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 526.998 kb on + strand, within H281DRAFT_00468 at 527.174 kb on + strand, within H281DRAFT_00468 at 527.229 kb on + strand, within H281DRAFT_00468 at 527.230 kb on - strand, within H281DRAFT_00468 at 527.230 kb on - strand, within H281DRAFT_00468 at 527.262 kb on + strand, within H281DRAFT_00468 at 527.328 kb on + strand, within H281DRAFT_00468 at 527.341 kb on + strand, within H281DRAFT_00468 at 527.583 kb on + strand at 527.584 kb on - strand at 527.597 kb on + strand at 527.626 kb on - strand at 527.626 kb on - strand at 527.626 kb on - strand at 527.637 kb on + strand at 527.637 kb on + strand at 527.638 kb on - strand at 527.638 kb on - strand at 527.727 kb on - strand at 527.804 kb on + strand at 527.818 kb on + strand at 527.818 kb on + strand at 527.918 kb on - strand at 527.918 kb on - strand at 527.944 kb on - strand at 527.970 kb on + strand at 528.106 kb on - strand, within H281DRAFT_00469 at 528.106 kb on - strand, within H281DRAFT_00469 at 528.279 kb on + strand, within H281DRAFT_00469 at 528.546 kb on + strand at 528.546 kb on + strand at 528.654 kb on + strand at 528.813 kb on - strand at 528.842 kb on + strand at 528.842 kb on + strand at 528.892 kb on + strand at 528.916 kb on + strand at 528.923 kb on + strand at 528.923 kb on + strand at 528.992 kb on - strand at 528.992 kb on - strand at 529.186 kb on + strand at 529.236 kb on + strand at 529.272 kb on + strand at 529.303 kb on + strand at 529.303 kb on + strand at 529.303 kb on + strand at 529.303 kb on + strand at 529.303 kb on + strand at 529.304 kb on - strand at 529.304 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 526,998 + H281DRAFT_00468 0.64 -1.8 527,174 + H281DRAFT_00468 0.74 -3.2 527,229 + H281DRAFT_00468 0.77 -1.2 527,230 - H281DRAFT_00468 0.78 -1.0 527,230 - H281DRAFT_00468 0.78 -3.0 527,262 + H281DRAFT_00468 0.79 -1.4 527,328 + H281DRAFT_00468 0.83 -1.8 527,341 + H281DRAFT_00468 0.84 -3.1 527,583 + -0.9 527,584 - -2.8 527,597 + -2.0 527,626 - +0.8 527,626 - -0.2 527,626 - -0.9 527,637 + -0.7 527,637 + -0.5 527,638 - -0.6 527,638 - -1.1 527,727 - +0.4 527,804 + +0.1 527,818 + -0.5 527,818 + -0.5 527,918 - +0.2 527,918 - +0.6 527,944 - -0.2 527,970 + +0.1 528,106 - H281DRAFT_00469 0.24 +0.3 528,106 - H281DRAFT_00469 0.24 +0.0 528,279 + H281DRAFT_00469 0.54 +0.4 528,546 + -0.4 528,546 + -0.5 528,654 + +0.6 528,813 - +0.2 528,842 + -0.1 528,842 + -0.4 528,892 + +0.1 528,916 + +0.3 528,923 + -0.2 528,923 + -1.0 528,992 - -0.4 528,992 - -0.5 529,186 + -0.4 529,236 + +1.2 529,272 + -0.3 529,303 + -0.7 529,303 + +0.5 529,303 + -1.0 529,303 + +0.5 529,303 + +0.7 529,304 - +0.7 529,304 - +1.0
Or see this region's nucleotide sequence