Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00058 and H281DRAFT_00059 are separated by 62 nucleotides H281DRAFT_00059 and H281DRAFT_00060 are separated by 195 nucleotides
H281DRAFT_00058: H281DRAFT_00058 - N-ethylmaleimide reductase, at 61,549 to 62,664
_00058
H281DRAFT_00059: H281DRAFT_00059 - Pimeloyl-ACP methyl ester carboxylesterase, at 62,727 to 63,497
_00059
H281DRAFT_00060: H281DRAFT_00060 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 63,693 to 64,238
_00060
Position (kb) 62
63
64 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 61.738 kb on - strand, within H281DRAFT_00058 at 62.092 kb on - strand, within H281DRAFT_00058 at 62.096 kb on - strand, within H281DRAFT_00058 at 62.146 kb on + strand at 62.147 kb on - strand at 62.308 kb on + strand, within H281DRAFT_00058 at 62.308 kb on + strand, within H281DRAFT_00058 at 62.309 kb on - strand, within H281DRAFT_00058 at 62.309 kb on - strand, within H281DRAFT_00058 at 62.363 kb on + strand, within H281DRAFT_00058 at 62.435 kb on - strand, within H281DRAFT_00058 at 62.452 kb on + strand, within H281DRAFT_00058 at 62.453 kb on - strand, within H281DRAFT_00058 at 62.590 kb on + strand at 62.597 kb on - strand at 62.691 kb on - strand at 63.012 kb on + strand, within H281DRAFT_00059 at 63.012 kb on + strand, within H281DRAFT_00059 at 63.012 kb on + strand, within H281DRAFT_00059 at 63.013 kb on - strand, within H281DRAFT_00059 at 63.013 kb on - strand, within H281DRAFT_00059 at 63.013 kb on - strand, within H281DRAFT_00059 at 63.029 kb on + strand, within H281DRAFT_00059 at 63.069 kb on + strand, within H281DRAFT_00059 at 63.174 kb on + strand, within H281DRAFT_00059 at 63.509 kb on - strand at 63.659 kb on - strand at 63.660 kb on + strand at 63.661 kb on - strand at 63.665 kb on + strand at 63.666 kb on - strand at 63.928 kb on + strand, within H281DRAFT_00060 at 63.929 kb on - strand, within H281DRAFT_00060 at 63.949 kb on + strand, within H281DRAFT_00060 at 63.950 kb on - strand, within H281DRAFT_00060 at 64.036 kb on - strand, within H281DRAFT_00060 at 64.036 kb on - strand, within H281DRAFT_00060 at 64.091 kb on - strand, within H281DRAFT_00060 at 64.091 kb on - strand, within H281DRAFT_00060 at 64.218 kb on + strand at 64.219 kb on - strand at 64.245 kb on - strand at 64.437 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 61,738 - H281DRAFT_00058 0.17 +1.0 62,092 - H281DRAFT_00058 0.49 -0.6 62,096 - H281DRAFT_00058 0.49 +0.2 62,146 + +0.7 62,147 - -0.6 62,308 + H281DRAFT_00058 0.68 -0.2 62,308 + H281DRAFT_00058 0.68 +0.1 62,309 - H281DRAFT_00058 0.68 +1.1 62,309 - H281DRAFT_00058 0.68 +0.2 62,363 + H281DRAFT_00058 0.73 -0.6 62,435 - H281DRAFT_00058 0.79 +0.3 62,452 + H281DRAFT_00058 0.81 +0.4 62,453 - H281DRAFT_00058 0.81 +0.6 62,590 + +0.1 62,597 - +0.4 62,691 - +0.7 63,012 + H281DRAFT_00059 0.37 +0.4 63,012 + H281DRAFT_00059 0.37 +0.4 63,012 + H281DRAFT_00059 0.37 +0.5 63,013 - H281DRAFT_00059 0.37 +0.9 63,013 - H281DRAFT_00059 0.37 -0.5 63,013 - H281DRAFT_00059 0.37 +0.1 63,029 + H281DRAFT_00059 0.39 +4.7 63,069 + H281DRAFT_00059 0.44 +0.7 63,174 + H281DRAFT_00059 0.58 -0.1 63,509 - +0.7 63,659 - +0.5 63,660 + -0.1 63,661 - +1.0 63,665 + -0.2 63,666 - -0.1 63,928 + H281DRAFT_00060 0.43 -0.7 63,929 - H281DRAFT_00060 0.43 +0.6 63,949 + H281DRAFT_00060 0.47 +0.6 63,950 - H281DRAFT_00060 0.47 +0.5 64,036 - H281DRAFT_00060 0.63 +0.1 64,036 - H281DRAFT_00060 0.63 -0.5 64,091 - H281DRAFT_00060 0.73 +1.2 64,091 - H281DRAFT_00060 0.73 -0.2 64,218 + -0.0 64,219 - -0.5 64,245 - +0.1 64,437 + +0.6
Or see this region's nucleotide sequence