Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06351 and H281DRAFT_06352 are separated by 14 nucleotides H281DRAFT_06352 and H281DRAFT_06353 are separated by 79 nucleotides H281DRAFT_06353 and H281DRAFT_06354 are separated by 127 nucleotides
H281DRAFT_06351: H281DRAFT_06351 - succinate semialdehyde dehydrogenase (EC 1.2.1.16), at 24,673 to 26,148
_06351
H281DRAFT_06352: H281DRAFT_06352 - 2-haloacid dehalogenase, at 26,163 to 26,882
_06352
H281DRAFT_06353: H281DRAFT_06353 - transcriptional regulator, LysR family, at 26,962 to 27,861
_06353
H281DRAFT_06354: H281DRAFT_06354 - Sugar phosphate permease, at 27,989 to 29,311
_06354
Position (kb) 26
27
28 Strain fitness (log2 ratio) -2
-1
0
1
2 at 26.000 kb on + strand, within H281DRAFT_06351 at 26.001 kb on - strand at 26.069 kb on - strand at 26.089 kb on + strand at 26.104 kb on + strand at 26.146 kb on + strand at 26.404 kb on + strand, within H281DRAFT_06352 at 26.405 kb on - strand, within H281DRAFT_06352 at 26.405 kb on - strand, within H281DRAFT_06352 at 26.430 kb on - strand, within H281DRAFT_06352 at 26.430 kb on - strand, within H281DRAFT_06352 at 26.430 kb on - strand, within H281DRAFT_06352 at 26.492 kb on + strand, within H281DRAFT_06352 at 26.492 kb on + strand, within H281DRAFT_06352 at 26.493 kb on - strand, within H281DRAFT_06352 at 26.494 kb on + strand, within H281DRAFT_06352 at 26.539 kb on + strand, within H281DRAFT_06352 at 26.540 kb on - strand, within H281DRAFT_06352 at 26.668 kb on + strand, within H281DRAFT_06352 at 26.669 kb on - strand, within H281DRAFT_06352 at 26.711 kb on - strand, within H281DRAFT_06352 at 26.911 kb on + strand at 26.924 kb on - strand at 26.928 kb on + strand at 27.148 kb on + strand, within H281DRAFT_06353 at 27.149 kb on - strand, within H281DRAFT_06353 at 27.174 kb on - strand at 27.268 kb on + strand, within H281DRAFT_06353 at 27.269 kb on - strand, within H281DRAFT_06353 at 27.631 kb on + strand, within H281DRAFT_06353 at 27.728 kb on - strand, within H281DRAFT_06353 at 27.858 kb on - strand at 27.873 kb on + strand at 27.934 kb on + strand at 27.988 kb on + strand at 27.988 kb on + strand at 28.029 kb on - strand at 28.178 kb on + strand, within H281DRAFT_06354 at 28.311 kb on - strand, within H281DRAFT_06354
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 26,000 + H281DRAFT_06351 0.90 +0.1 26,001 - +1.4 26,069 - +0.7 26,089 + +1.3 26,104 + -0.0 26,146 + -0.1 26,404 + H281DRAFT_06352 0.33 +0.3 26,405 - H281DRAFT_06352 0.34 -0.3 26,405 - H281DRAFT_06352 0.34 -0.7 26,430 - H281DRAFT_06352 0.37 -0.1 26,430 - H281DRAFT_06352 0.37 +0.1 26,430 - H281DRAFT_06352 0.37 +0.3 26,492 + H281DRAFT_06352 0.46 -0.1 26,492 + H281DRAFT_06352 0.46 -0.7 26,493 - H281DRAFT_06352 0.46 -1.8 26,494 + H281DRAFT_06352 0.46 -0.3 26,539 + H281DRAFT_06352 0.52 -0.4 26,540 - H281DRAFT_06352 0.52 -0.8 26,668 + H281DRAFT_06352 0.70 +0.3 26,669 - H281DRAFT_06352 0.70 -1.5 26,711 - H281DRAFT_06352 0.76 -0.3 26,911 + +0.3 26,924 - -0.6 26,928 + +0.0 27,148 + H281DRAFT_06353 0.21 -0.3 27,149 - H281DRAFT_06353 0.21 -0.1 27,174 - +0.4 27,268 + H281DRAFT_06353 0.34 -0.1 27,269 - H281DRAFT_06353 0.34 +0.7 27,631 + H281DRAFT_06353 0.74 -0.9 27,728 - H281DRAFT_06353 0.85 -0.6 27,858 - -0.2 27,873 + +1.0 27,934 + +1.4 27,988 + +0.4 27,988 + +2.4 28,029 - +1.1 28,178 + H281DRAFT_06354 0.14 +0.3 28,311 - H281DRAFT_06354 0.24 -0.8
Or see this region's nucleotide sequence