Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05160 and H281DRAFT_05161 overlap by 4 nucleotides H281DRAFT_05161 and H281DRAFT_05162 are separated by 368 nucleotides H281DRAFT_05162 and H281DRAFT_05163 are separated by 184 nucleotides
H281DRAFT_05160: H281DRAFT_05160 - allantoicase, at 113,631 to 114,644
_05160
H281DRAFT_05161: H281DRAFT_05161 - ureidoglycolate lyase, at 114,641 to 115,153
_05161
H281DRAFT_05162: H281DRAFT_05162 - Uncharacterized membrane protein, at 115,522 to 116,715
_05162
H281DRAFT_05163: H281DRAFT_05163 - 5-hydroxyisourate hydrolase, at 116,900 to 117,253
_05163
Position (kb) 115
116
117 Strain fitness (log2 ratio) -2
-1
0
1
2 at 114.535 kb on - strand, within H281DRAFT_05160 at 115.275 kb on - strand at 115.275 kb on - strand at 115.280 kb on + strand at 115.426 kb on + strand at 115.427 kb on - strand at 115.492 kb on - strand at 115.631 kb on + strand at 115.632 kb on - strand at 115.668 kb on + strand, within H281DRAFT_05162 at 115.669 kb on - strand, within H281DRAFT_05162 at 115.871 kb on + strand, within H281DRAFT_05162 at 115.871 kb on + strand, within H281DRAFT_05162 at 115.872 kb on - strand, within H281DRAFT_05162 at 115.961 kb on + strand, within H281DRAFT_05162 at 115.962 kb on - strand, within H281DRAFT_05162 at 115.973 kb on + strand, within H281DRAFT_05162 at 115.974 kb on - strand, within H281DRAFT_05162 at 115.974 kb on - strand, within H281DRAFT_05162 at 116.027 kb on + strand, within H281DRAFT_05162 at 116.066 kb on + strand, within H281DRAFT_05162 at 116.187 kb on - strand, within H281DRAFT_05162 at 116.263 kb on + strand, within H281DRAFT_05162 at 116.263 kb on + strand, within H281DRAFT_05162 at 116.264 kb on - strand, within H281DRAFT_05162 at 116.303 kb on + strand, within H281DRAFT_05162 at 116.391 kb on - strand, within H281DRAFT_05162 at 116.510 kb on + strand, within H281DRAFT_05162 at 116.511 kb on - strand, within H281DRAFT_05162 at 116.511 kb on - strand, within H281DRAFT_05162 at 116.511 kb on - strand, within H281DRAFT_05162 at 116.525 kb on + strand, within H281DRAFT_05162 at 116.543 kb on - strand, within H281DRAFT_05162 at 116.628 kb on - strand at 117.305 kb on + strand at 117.342 kb on - strand at 117.387 kb on - strand at 117.387 kb on - strand at 117.387 kb on - strand at 117.429 kb on + strand at 117.430 kb on - strand at 117.430 kb on - strand at 117.497 kb on + strand at 117.497 kb on + strand at 117.539 kb on + strand at 117.539 kb on + strand at 117.539 kb on + strand at 117.540 kb on - strand at 117.680 kb on + strand at 117.680 kb on + strand at 117.681 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 114,535 - H281DRAFT_05160 0.89 -0.5 115,275 - -0.4 115,275 - +0.9 115,280 + -0.2 115,426 + +0.9 115,427 - +0.2 115,492 - -0.2 115,631 + -0.7 115,632 - +0.7 115,668 + H281DRAFT_05162 0.12 +0.4 115,669 - H281DRAFT_05162 0.12 +0.2 115,871 + H281DRAFT_05162 0.29 -0.3 115,871 + H281DRAFT_05162 0.29 -0.5 115,872 - H281DRAFT_05162 0.29 -1.0 115,961 + H281DRAFT_05162 0.37 -2.0 115,962 - H281DRAFT_05162 0.37 +0.2 115,973 + H281DRAFT_05162 0.38 -2.7 115,974 - H281DRAFT_05162 0.38 -0.4 115,974 - H281DRAFT_05162 0.38 -0.1 116,027 + H281DRAFT_05162 0.42 +0.0 116,066 + H281DRAFT_05162 0.46 -0.7 116,187 - H281DRAFT_05162 0.56 +0.1 116,263 + H281DRAFT_05162 0.62 +0.1 116,263 + H281DRAFT_05162 0.62 -0.4 116,264 - H281DRAFT_05162 0.62 -1.2 116,303 + H281DRAFT_05162 0.65 -1.0 116,391 - H281DRAFT_05162 0.73 +0.1 116,510 + H281DRAFT_05162 0.83 -1.7 116,511 - H281DRAFT_05162 0.83 -1.7 116,511 - H281DRAFT_05162 0.83 -0.1 116,511 - H281DRAFT_05162 0.83 -0.4 116,525 + H281DRAFT_05162 0.84 -0.4 116,543 - H281DRAFT_05162 0.86 -0.9 116,628 - +0.6 117,305 + +0.3 117,342 - -0.3 117,387 - -0.7 117,387 - +0.5 117,387 - +0.3 117,429 + -0.6 117,430 - -0.3 117,430 - +0.2 117,497 + -0.9 117,497 + +0.5 117,539 + -0.0 117,539 + +0.1 117,539 + -0.3 117,540 - +0.1 117,680 + -0.8 117,680 + +0.2 117,681 - +1.8
Or see this region's nucleotide sequence