Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04096 and H281DRAFT_04097 are separated by 207 nucleotides H281DRAFT_04097 and H281DRAFT_04098 are separated by 42 nucleotides H281DRAFT_04098 and H281DRAFT_04099 are separated by 128 nucleotides
H281DRAFT_04096: H281DRAFT_04096 - Aldo/keto reductase, at 204,006 to 204,851
_04096
H281DRAFT_04097: H281DRAFT_04097 - transcriptional regulator, GntR family, at 205,059 to 205,805
_04097
H281DRAFT_04098: H281DRAFT_04098 - Predicted acyl-CoA transferases/carnitine dehydratase, at 205,848 to 207,266
_04098
H281DRAFT_04099: H281DRAFT_04099 - citrate synthase, at 207,395 to 208,624
_04099
Position (kb) 205
206
207
208 Strain fitness (log2 ratio) -2
-1
0
1 at 204.945 kb on + strand at 205.004 kb on + strand at 205.046 kb on + strand at 205.051 kb on + strand at 205.052 kb on - strand at 205.247 kb on + strand, within H281DRAFT_04097 at 205.247 kb on + strand, within H281DRAFT_04097 at 205.248 kb on - strand, within H281DRAFT_04097 at 205.324 kb on - strand, within H281DRAFT_04097 at 205.382 kb on + strand, within H281DRAFT_04097 at 205.439 kb on - strand, within H281DRAFT_04097 at 205.547 kb on - strand, within H281DRAFT_04097 at 205.547 kb on - strand, within H281DRAFT_04097 at 205.581 kb on + strand, within H281DRAFT_04097 at 205.581 kb on + strand, within H281DRAFT_04097 at 205.588 kb on - strand, within H281DRAFT_04097 at 205.588 kb on - strand, within H281DRAFT_04097 at 205.588 kb on - strand, within H281DRAFT_04097 at 205.721 kb on + strand, within H281DRAFT_04097 at 205.722 kb on - strand, within H281DRAFT_04097 at 205.758 kb on + strand at 205.758 kb on + strand at 205.758 kb on + strand at 205.776 kb on + strand at 205.776 kb on + strand at 205.776 kb on + strand at 205.777 kb on - strand at 205.804 kb on - strand at 205.829 kb on - strand at 206.288 kb on - strand, within H281DRAFT_04098 at 206.293 kb on + strand, within H281DRAFT_04098 at 206.311 kb on + strand, within H281DRAFT_04098 at 206.311 kb on + strand, within H281DRAFT_04098 at 206.311 kb on + strand, within H281DRAFT_04098 at 206.311 kb on + strand, within H281DRAFT_04098 at 206.311 kb on + strand, within H281DRAFT_04098 at 206.311 kb on + strand, within H281DRAFT_04098 at 206.311 kb on + strand, within H281DRAFT_04098 at 206.312 kb on - strand, within H281DRAFT_04098 at 206.312 kb on - strand, within H281DRAFT_04098 at 206.312 kb on - strand, within H281DRAFT_04098 at 206.312 kb on - strand, within H281DRAFT_04098 at 206.312 kb on - strand, within H281DRAFT_04098 at 206.925 kb on - strand, within H281DRAFT_04098 at 207.160 kb on - strand at 207.465 kb on - strand at 207.465 kb on - strand at 207.465 kb on - strand at 207.465 kb on - strand at 207.470 kb on + strand at 207.470 kb on + strand at 207.471 kb on - strand at 207.471 kb on - strand at 207.471 kb on - strand at 207.471 kb on - strand at 207.471 kb on - strand at 208.207 kb on - strand, within H281DRAFT_04099
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 204,945 + +1.0 205,004 + +0.4 205,046 + -0.5 205,051 + -0.0 205,052 - +0.1 205,247 + H281DRAFT_04097 0.25 -0.8 205,247 + H281DRAFT_04097 0.25 +0.4 205,248 - H281DRAFT_04097 0.25 +1.6 205,324 - H281DRAFT_04097 0.35 -0.3 205,382 + H281DRAFT_04097 0.43 -1.1 205,439 - H281DRAFT_04097 0.51 -1.2 205,547 - H281DRAFT_04097 0.65 -0.3 205,547 - H281DRAFT_04097 0.65 -0.9 205,581 + H281DRAFT_04097 0.70 +1.1 205,581 + H281DRAFT_04097 0.70 -1.1 205,588 - H281DRAFT_04097 0.71 -0.1 205,588 - H281DRAFT_04097 0.71 -0.4 205,588 - H281DRAFT_04097 0.71 -2.0 205,721 + H281DRAFT_04097 0.89 -1.0 205,722 - H281DRAFT_04097 0.89 +0.1 205,758 + -0.6 205,758 + -1.2 205,758 + -0.8 205,776 + +0.6 205,776 + -0.7 205,776 + -0.4 205,777 - -0.2 205,804 - -0.0 205,829 - -0.1 206,288 - H281DRAFT_04098 0.31 +0.1 206,293 + H281DRAFT_04098 0.31 -1.2 206,311 + H281DRAFT_04098 0.33 +1.7 206,311 + H281DRAFT_04098 0.33 +0.3 206,311 + H281DRAFT_04098 0.33 +0.6 206,311 + H281DRAFT_04098 0.33 -0.3 206,311 + H281DRAFT_04098 0.33 +0.2 206,311 + H281DRAFT_04098 0.33 -0.5 206,311 + H281DRAFT_04098 0.33 -0.1 206,312 - H281DRAFT_04098 0.33 +0.6 206,312 - H281DRAFT_04098 0.33 +1.4 206,312 - H281DRAFT_04098 0.33 +0.6 206,312 - H281DRAFT_04098 0.33 +0.1 206,312 - H281DRAFT_04098 0.33 +0.6 206,925 - H281DRAFT_04098 0.76 -0.3 207,160 - -0.5 207,465 - -0.4 207,465 - +0.5 207,465 - -2.0 207,465 - +0.9 207,470 + +0.2 207,470 + -0.4 207,471 - -0.3 207,471 - +0.7 207,471 - +0.1 207,471 - -0.2 207,471 - +0.2 208,207 - H281DRAFT_04099 0.66 -0.3
Or see this region's nucleotide sequence