Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03377 and H281DRAFT_03378 are separated by 67 nucleotides H281DRAFT_03378 and H281DRAFT_03379 are separated by 39 nucleotides
H281DRAFT_03377: H281DRAFT_03377 - D-threo-aldose 1-dehydrogenase, at 442,694 to 443,752
_03377
H281DRAFT_03378: H281DRAFT_03378 - monosaccharide ABC transporter substrate-binding protein, CUT2 family, at 443,820 to 444,767
_03378
H281DRAFT_03379: H281DRAFT_03379 - monosaccharide ABC transporter membrane protein, CUT2 family, at 444,807 to 445,838
_03379
Position (kb) 443
444
445 Strain fitness (log2 ratio) -1
0
1 at 443.005 kb on - strand, within H281DRAFT_03377 at 443.126 kb on - strand, within H281DRAFT_03377 at 443.334 kb on + strand, within H281DRAFT_03377 at 443.408 kb on - strand, within H281DRAFT_03377 at 443.409 kb on + strand, within H281DRAFT_03377 at 443.515 kb on - strand, within H281DRAFT_03377 at 443.578 kb on - strand, within H281DRAFT_03377 at 444.388 kb on + strand, within H281DRAFT_03378 at 444.389 kb on - strand, within H281DRAFT_03378 at 444.389 kb on - strand, within H281DRAFT_03378 at 444.391 kb on + strand, within H281DRAFT_03378 at 444.652 kb on + strand, within H281DRAFT_03378 at 445.111 kb on + strand, within H281DRAFT_03379 at 445.111 kb on + strand, within H281DRAFT_03379 at 445.183 kb on + strand, within H281DRAFT_03379 at 445.237 kb on - strand, within H281DRAFT_03379 at 445.308 kb on - strand, within H281DRAFT_03379 at 445.737 kb on + strand at 445.767 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 443,005 - H281DRAFT_03377 0.29 -0.2 443,126 - H281DRAFT_03377 0.41 +0.2 443,334 + H281DRAFT_03377 0.60 +0.9 443,408 - H281DRAFT_03377 0.67 -0.7 443,409 + H281DRAFT_03377 0.68 -0.3 443,515 - H281DRAFT_03377 0.78 +0.9 443,578 - H281DRAFT_03377 0.83 +0.1 444,388 + H281DRAFT_03378 0.60 -0.6 444,389 - H281DRAFT_03378 0.60 -0.0 444,389 - H281DRAFT_03378 0.60 +1.6 444,391 + H281DRAFT_03378 0.60 +0.6 444,652 + H281DRAFT_03378 0.88 +0.5 445,111 + H281DRAFT_03379 0.29 +0.2 445,111 + H281DRAFT_03379 0.29 +0.5 445,183 + H281DRAFT_03379 0.36 -1.3 445,237 - H281DRAFT_03379 0.42 -0.6 445,308 - H281DRAFT_03379 0.49 +0.1 445,737 + +1.0 445,767 + -0.3
Or see this region's nucleotide sequence