Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02949 and H281DRAFT_02950 are separated by 181 nucleotides H281DRAFT_02950 and H281DRAFT_02951 are separated by 16 nucleotides H281DRAFT_02951 and H281DRAFT_02952 are separated by 56 nucleotides
H281DRAFT_02949: H281DRAFT_02949 - Xaa-Pro aminopeptidase, at 562,928 to 564,094
_02949
H281DRAFT_02950: H281DRAFT_02950 - DNA-binding transcriptional regulator, LysR family, at 564,276 to 565,265
_02950
H281DRAFT_02951: H281DRAFT_02951 - 5-deoxyglucuronate isomerase, at 565,282 to 566,112
_02951
H281DRAFT_02952: H281DRAFT_02952 - fructuronate reductase, at 566,169 to 567,662
_02952
Position (kb) 564
565
566 Strain fitness (log2 ratio) -1
0
1 at 563.424 kb on + strand, within H281DRAFT_02949 at 563.425 kb on - strand, within H281DRAFT_02949 at 563.529 kb on + strand, within H281DRAFT_02949 at 563.718 kb on + strand, within H281DRAFT_02949 at 563.719 kb on - strand, within H281DRAFT_02949 at 563.719 kb on - strand, within H281DRAFT_02949 at 563.719 kb on - strand, within H281DRAFT_02949 at 564.161 kb on - strand at 564.195 kb on + strand at 564.196 kb on - strand at 564.199 kb on + strand at 564.199 kb on + strand at 564.200 kb on - strand at 564.200 kb on - strand at 564.202 kb on + strand at 564.202 kb on + strand at 564.203 kb on - strand at 564.243 kb on - strand at 564.291 kb on - strand at 564.355 kb on + strand at 564.573 kb on + strand, within H281DRAFT_02950 at 564.573 kb on + strand, within H281DRAFT_02950 at 564.574 kb on - strand, within H281DRAFT_02950 at 565.324 kb on + strand at 565.395 kb on - strand at 565.548 kb on - strand, within H281DRAFT_02951 at 565.550 kb on + strand, within H281DRAFT_02951 at 565.551 kb on - strand, within H281DRAFT_02951 at 565.565 kb on + strand, within H281DRAFT_02951 at 565.566 kb on - strand, within H281DRAFT_02951 at 565.851 kb on - strand at 565.955 kb on - strand, within H281DRAFT_02951 at 566.028 kb on - strand, within H281DRAFT_02951
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 563,424 + H281DRAFT_02949 0.43 +0.6 563,425 - H281DRAFT_02949 0.43 +0.4 563,529 + H281DRAFT_02949 0.51 +1.3 563,718 + H281DRAFT_02949 0.68 +0.2 563,719 - H281DRAFT_02949 0.68 -0.5 563,719 - H281DRAFT_02949 0.68 +0.4 563,719 - H281DRAFT_02949 0.68 +0.6 564,161 - -0.6 564,195 + +0.1 564,196 - -0.9 564,199 + -0.4 564,199 + +0.5 564,200 - +1.1 564,200 - +0.2 564,202 + +0.9 564,202 + -0.6 564,203 - -0.1 564,243 - -0.7 564,291 - -1.4 564,355 + -0.5 564,573 + H281DRAFT_02950 0.30 +0.2 564,573 + H281DRAFT_02950 0.30 -0.9 564,574 - H281DRAFT_02950 0.30 -0.2 565,324 + -0.0 565,395 - +1.3 565,548 - H281DRAFT_02951 0.32 -0.5 565,550 + H281DRAFT_02951 0.32 -0.5 565,551 - H281DRAFT_02951 0.32 -1.2 565,565 + H281DRAFT_02951 0.34 +0.3 565,566 - H281DRAFT_02951 0.34 -0.4 565,851 - +0.9 565,955 - H281DRAFT_02951 0.81 -0.5 566,028 - H281DRAFT_02951 0.90 -0.3
Or see this region's nucleotide sequence