Experiment: Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00036 and H281DRAFT_00037 are separated by 916 nucleotides H281DRAFT_00037 and H281DRAFT_00038 are separated by 273 nucleotides H281DRAFT_00038 and H281DRAFT_00039 are separated by 130 nucleotides
H281DRAFT_00036: H281DRAFT_00036 - DNA-binding winged helix-turn-helix (wHTH) domain-containing protein, at 37,989 to 40,754
_00036
H281DRAFT_00037: H281DRAFT_00037 - NAD(P)H dehydrogenase (quinone), at 41,671 to 42,525
_00037
H281DRAFT_00038: H281DRAFT_00038 - transcriptional regulator, HxlR family, at 42,799 to 43,140
_00038
H281DRAFT_00039: H281DRAFT_00039 - Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases, at 43,271 to 43,609
_00039
Position (kb) 41
42
43 Strain fitness (log2 ratio) -1
0
1 at 40.757 kb on + strand at 40.758 kb on - strand at 41.042 kb on - strand at 41.107 kb on + strand at 41.108 kb on - strand at 41.257 kb on + strand at 41.257 kb on + strand at 41.257 kb on + strand at 41.258 kb on - strand at 41.261 kb on + strand at 41.262 kb on - strand at 41.332 kb on + strand at 41.333 kb on - strand at 41.333 kb on - strand at 41.357 kb on - strand at 41.364 kb on + strand at 41.365 kb on - strand at 41.401 kb on - strand at 41.455 kb on - strand at 41.455 kb on - strand at 41.502 kb on + strand at 41.567 kb on + strand at 41.568 kb on - strand at 41.628 kb on - strand at 41.716 kb on - strand at 41.830 kb on + strand, within H281DRAFT_00037 at 41.836 kb on + strand, within H281DRAFT_00037 at 41.836 kb on + strand, within H281DRAFT_00037 at 41.836 kb on + strand, within H281DRAFT_00037 at 41.836 kb on + strand, within H281DRAFT_00037 at 41.836 kb on + strand, within H281DRAFT_00037 at 41.836 kb on + strand, within H281DRAFT_00037 at 41.836 kb on + strand, within H281DRAFT_00037 at 41.870 kb on + strand, within H281DRAFT_00037 at 41.870 kb on + strand, within H281DRAFT_00037 at 41.870 kb on + strand, within H281DRAFT_00037 at 41.871 kb on - strand, within H281DRAFT_00037 at 41.871 kb on - strand, within H281DRAFT_00037 at 41.874 kb on + strand, within H281DRAFT_00037 at 41.874 kb on + strand, within H281DRAFT_00037 at 41.951 kb on + strand, within H281DRAFT_00037 at 41.951 kb on + strand, within H281DRAFT_00037 at 41.951 kb on + strand, within H281DRAFT_00037 at 41.951 kb on + strand, within H281DRAFT_00037 at 41.952 kb on - strand, within H281DRAFT_00037 at 41.952 kb on - strand, within H281DRAFT_00037 at 41.952 kb on - strand, within H281DRAFT_00037 at 41.952 kb on - strand, within H281DRAFT_00037 at 42.122 kb on - strand, within H281DRAFT_00037 at 42.156 kb on - strand, within H281DRAFT_00037 at 42.187 kb on + strand, within H281DRAFT_00037 at 42.188 kb on - strand, within H281DRAFT_00037 at 42.222 kb on + strand, within H281DRAFT_00037 at 42.222 kb on + strand, within H281DRAFT_00037 at 42.222 kb on + strand, within H281DRAFT_00037 at 42.223 kb on - strand, within H281DRAFT_00037 at 42.223 kb on - strand, within H281DRAFT_00037 at 42.319 kb on + strand, within H281DRAFT_00037 at 42.368 kb on + strand, within H281DRAFT_00037 at 42.369 kb on - strand, within H281DRAFT_00037 at 42.545 kb on + strand at 42.625 kb on - strand at 42.691 kb on + strand at 42.691 kb on + strand at 42.691 kb on + strand at 42.695 kb on - strand at 42.716 kb on - strand at 42.728 kb on - strand at 42.892 kb on + strand, within H281DRAFT_00038 at 42.970 kb on - strand, within H281DRAFT_00038 at 42.970 kb on - strand, within H281DRAFT_00038 at 43.045 kb on + strand, within H281DRAFT_00038 at 43.058 kb on + strand, within H281DRAFT_00038 at 43.151 kb on + strand at 43.151 kb on + strand at 43.151 kb on + strand at 43.151 kb on + strand at 43.153 kb on + strand at 43.153 kb on + strand at 43.199 kb on + strand at 43.263 kb on + strand at 43.272 kb on + strand at 43.272 kb on + strand at 43.272 kb on + strand at 43.273 kb on - strand at 43.273 kb on - strand at 43.276 kb on + strand at 43.498 kb on - strand, within H281DRAFT_00039 at 43.498 kb on - strand, within H281DRAFT_00039
Per-strain Table
Position Strand Gene LocusTag Fraction Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days remove 40,757 + -0.6 40,758 - +0.5 41,042 - -0.3 41,107 + -0.2 41,108 - +0.0 41,257 + +0.5 41,257 + -0.5 41,257 + -0.1 41,258 - -0.2 41,261 + +0.3 41,262 - +0.5 41,332 + -0.4 41,333 - +1.3 41,333 - +0.7 41,357 - -0.2 41,364 + -0.3 41,365 - +0.3 41,401 - +0.4 41,455 - +0.3 41,455 - -0.6 41,502 + +0.0 41,567 + -0.6 41,568 - +0.1 41,628 - +0.5 41,716 - -0.1 41,830 + H281DRAFT_00037 0.19 +0.8 41,836 + H281DRAFT_00037 0.19 +0.3 41,836 + H281DRAFT_00037 0.19 -0.2 41,836 + H281DRAFT_00037 0.19 -0.3 41,836 + H281DRAFT_00037 0.19 +0.5 41,836 + H281DRAFT_00037 0.19 -0.2 41,836 + H281DRAFT_00037 0.19 -0.4 41,836 + H281DRAFT_00037 0.19 +0.3 41,870 + H281DRAFT_00037 0.23 -0.0 41,870 + H281DRAFT_00037 0.23 +0.3 41,870 + H281DRAFT_00037 0.23 -1.2 41,871 - H281DRAFT_00037 0.23 +0.2 41,871 - H281DRAFT_00037 0.23 +0.7 41,874 + H281DRAFT_00037 0.24 +0.1 41,874 + H281DRAFT_00037 0.24 -1.4 41,951 + H281DRAFT_00037 0.33 +0.3 41,951 + H281DRAFT_00037 0.33 +0.6 41,951 + H281DRAFT_00037 0.33 +0.0 41,951 + H281DRAFT_00037 0.33 +0.7 41,952 - H281DRAFT_00037 0.33 +0.8 41,952 - H281DRAFT_00037 0.33 +0.3 41,952 - H281DRAFT_00037 0.33 -0.2 41,952 - H281DRAFT_00037 0.33 -0.1 42,122 - H281DRAFT_00037 0.53 +0.4 42,156 - H281DRAFT_00037 0.57 +0.4 42,187 + H281DRAFT_00037 0.60 -0.7 42,188 - H281DRAFT_00037 0.60 -1.4 42,222 + H281DRAFT_00037 0.64 +0.3 42,222 + H281DRAFT_00037 0.64 -0.6 42,222 + H281DRAFT_00037 0.64 +0.1 42,223 - H281DRAFT_00037 0.65 +0.3 42,223 - H281DRAFT_00037 0.65 +0.2 42,319 + H281DRAFT_00037 0.76 -0.3 42,368 + H281DRAFT_00037 0.82 +0.7 42,369 - H281DRAFT_00037 0.82 +0.4 42,545 + +0.8 42,625 - +0.1 42,691 + +0.4 42,691 + -0.0 42,691 + -0.1 42,695 - -0.5 42,716 - +0.1 42,728 - +0.2 42,892 + H281DRAFT_00038 0.27 -0.7 42,970 - H281DRAFT_00038 0.50 +0.1 42,970 - H281DRAFT_00038 0.50 +0.5 43,045 + H281DRAFT_00038 0.72 -0.0 43,058 + H281DRAFT_00038 0.76 +0.5 43,151 + -0.7 43,151 + -1.0 43,151 + -0.5 43,151 + -0.3 43,153 + +0.5 43,153 + -1.0 43,199 + -0.1 43,263 + +0.2 43,272 + +0.2 43,272 + -1.2 43,272 + +0.4 43,273 - -0.5 43,273 - +0.1 43,276 + -0.3 43,498 - H281DRAFT_00039 0.67 +0.2 43,498 - H281DRAFT_00039 0.67 +0.1
Or see this region's nucleotide sequence