Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05921 and H281DRAFT_05922 are separated by 130 nucleotides H281DRAFT_05922 and H281DRAFT_05923 are separated by 388 nucleotides H281DRAFT_05923 and H281DRAFT_05924 are separated by 342 nucleotides
H281DRAFT_05921: H281DRAFT_05921 - Sugar phosphate permease, at 54,638 to 55,990
_05921
H281DRAFT_05922: H281DRAFT_05922 - hypothetical protein, at 56,121 to 56,456
_05922
H281DRAFT_05923: H281DRAFT_05923 - EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant), at 56,845 to 57,630
_05923
H281DRAFT_05924: H281DRAFT_05924 - PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein, at 57,973 to 60,384
_05924
Position (kb) 56
57
58 Strain fitness (log2 ratio) -1
0
1
2
3 at 55.898 kb on + strand at 55.899 kb on - strand at 56.111 kb on + strand at 56.190 kb on - strand, within H281DRAFT_05922 at 56.296 kb on - strand, within H281DRAFT_05922 at 56.583 kb on + strand at 56.583 kb on + strand at 56.675 kb on + strand at 56.881 kb on - strand at 56.909 kb on + strand at 56.910 kb on - strand at 56.992 kb on - strand, within H281DRAFT_05923 at 57.176 kb on + strand, within H281DRAFT_05923 at 57.176 kb on + strand, within H281DRAFT_05923 at 57.177 kb on - strand, within H281DRAFT_05923 at 57.177 kb on - strand, within H281DRAFT_05923 at 57.243 kb on + strand, within H281DRAFT_05923 at 57.511 kb on + strand at 57.511 kb on + strand, within H281DRAFT_05923 at 57.514 kb on - strand, within H281DRAFT_05923 at 57.640 kb on - strand at 57.771 kb on + strand at 57.772 kb on - strand at 57.911 kb on - strand at 57.922 kb on - strand at 57.922 kb on - strand at 58.050 kb on + strand at 58.051 kb on - strand at 58.163 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 55,898 + +0.8 55,899 - -0.2 56,111 + +1.4 56,190 - H281DRAFT_05922 0.21 +0.3 56,296 - H281DRAFT_05922 0.52 -0.2 56,583 + +0.5 56,583 + +0.6 56,675 + +0.4 56,881 - +0.3 56,909 + -0.3 56,910 - -0.0 56,992 - H281DRAFT_05923 0.19 -0.8 57,176 + H281DRAFT_05923 0.42 +0.3 57,176 + H281DRAFT_05923 0.42 +3.1 57,177 - H281DRAFT_05923 0.42 +0.2 57,177 - H281DRAFT_05923 0.42 +0.0 57,243 + H281DRAFT_05923 0.51 +1.2 57,511 + +0.4 57,511 + H281DRAFT_05923 0.85 +0.5 57,514 - H281DRAFT_05923 0.85 +0.2 57,640 - -0.7 57,771 + +0.7 57,772 - -0.1 57,911 - +0.2 57,922 - -1.4 57,922 - +0.1 58,050 + -0.0 58,051 - -0.0 58,163 + +0.2
Or see this region's nucleotide sequence