Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_05762

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_05761 and H281DRAFT_05762 are separated by 215 nucleotidesH281DRAFT_05762 and H281DRAFT_05763 are separated by 102 nucleotidesH281DRAFT_05763 and H281DRAFT_05764 are separated by 10 nucleotides H281DRAFT_05761: H281DRAFT_05761 - flagella basal body P-ring formation protein FlgA, at 34,497 to 36,059 _05761 H281DRAFT_05762: H281DRAFT_05762 - flagellar basal-body rod protein FlgB, at 36,275 to 36,766 _05762 H281DRAFT_05763: H281DRAFT_05763 - flagellar basal-body rod protein FlgC, at 36,869 to 37,294 _05763 H281DRAFT_05764: H281DRAFT_05764 - flagellar basal-body rod modification protein FlgD, at 37,305 to 38,036 _05764 Position (kb) 36 37Strain fitness (log2 ratio) -1 0 1at 35.795 kb on + strand, within H281DRAFT_05761at 35.796 kb on - strand, within H281DRAFT_05761at 35.796 kb on - strand, within H281DRAFT_05761at 35.813 kb on + strand, within H281DRAFT_05761at 36.086 kb on - strandat 36.099 kb on + strandat 36.099 kb on + strandat 36.099 kb on + strandat 36.100 kb on - strandat 36.131 kb on - strandat 36.151 kb on - strandat 36.151 kb on - strandat 36.183 kb on - strandat 36.274 kb on + strandat 36.275 kb on - strandat 36.275 kb on - strandat 36.275 kb on - strandat 36.387 kb on - strand, within H281DRAFT_05762at 36.458 kb on - strand, within H281DRAFT_05762at 36.652 kb on + strand, within H281DRAFT_05762at 36.801 kb on + strandat 36.827 kb on + strandat 36.888 kb on + strandat 36.888 kb on + strandat 36.888 kb on + strandat 36.888 kb on + strandat 36.889 kb on - strandat 36.889 kb on - strandat 36.889 kb on - strandat 36.889 kb on - strandat 36.889 kb on - strandat 36.889 kb on - strandat 36.889 kb on - strandat 36.995 kb on + strand, within H281DRAFT_05763at 36.996 kb on - strand, within H281DRAFT_05763at 36.996 kb on - strand, within H281DRAFT_05763at 36.996 kb on - strand, within H281DRAFT_05763at 37.157 kb on + strand, within H281DRAFT_05763at 37.158 kb on - strand, within H281DRAFT_05763at 37.365 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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35,795 + H281DRAFT_05761 0.83 +0.4
35,796 - H281DRAFT_05761 0.83 +0.5
35,796 - H281DRAFT_05761 0.83 +0.3
35,813 + H281DRAFT_05761 0.84 +0.6
36,086 - +0.6
36,099 + -1.5
36,099 + -1.5
36,099 + -0.2
36,100 - -0.1
36,131 - +0.9
36,151 - -0.3
36,151 - +0.6
36,183 - +0.6
36,274 + +0.1
36,275 - -0.2
36,275 - +0.5
36,275 - -0.1
36,387 - H281DRAFT_05762 0.23 +0.8
36,458 - H281DRAFT_05762 0.37 +0.7
36,652 + H281DRAFT_05762 0.77 +0.6
36,801 + +0.1
36,827 + +0.3
36,888 + +0.5
36,888 + +0.6
36,888 + +0.6
36,888 + +0.8
36,889 - +1.0
36,889 - +0.7
36,889 - +0.4
36,889 - +1.0
36,889 - +0.7
36,889 - +1.3
36,889 - +0.8
36,995 + H281DRAFT_05763 0.30 -0.1
36,996 - H281DRAFT_05763 0.30 +0.4
36,996 - H281DRAFT_05763 0.30 +1.0
36,996 - H281DRAFT_05763 0.30 +0.9
37,157 + H281DRAFT_05763 0.68 +0.8
37,158 - H281DRAFT_05763 0.68 +0.7
37,365 - +0.9

Or see this region's nucleotide sequence