Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05357 and H281DRAFT_05358 are separated by 409 nucleotides H281DRAFT_05358 and H281DRAFT_05359 are separated by 75 nucleotides H281DRAFT_05359 and H281DRAFT_05360 overlap by 4 nucleotides
H281DRAFT_05357: H281DRAFT_05357 - ornithine cyclodeaminase, at 109,498 to 110,433
_05357
H281DRAFT_05358: H281DRAFT_05358 - glucose-6-phosphate 1-dehydrogenase, at 110,843 to 112,324
_05358
H281DRAFT_05359: H281DRAFT_05359 - type VI secretion system protein ImpK, at 112,400 to 113,179
_05359
H281DRAFT_05360: H281DRAFT_05360 - type VI secretion system protein ImpJ, at 113,176 to 114,522
_05360
Position (kb)
110
111
112
113 Strain fitness (log2 ratio)
-2
-1
0
1 at 109.952 kb on - strand, within H281DRAFT_05357 at 110.123 kb on - strand, within H281DRAFT_05357 at 110.497 kb on + strand at 110.529 kb on - strand at 110.532 kb on + strand at 110.533 kb on - strand at 110.609 kb on + strand at 110.610 kb on - strand at 110.666 kb on + strand at 110.842 kb on + strand at 110.945 kb on + strand at 110.945 kb on + strand at 110.945 kb on + strand at 110.945 kb on + strand at 110.945 kb on + strand at 110.946 kb on - strand at 110.946 kb on - strand at 110.946 kb on - strand at 111.026 kb on + strand, within H281DRAFT_05358 at 111.123 kb on - strand, within H281DRAFT_05358 at 111.155 kb on + strand, within H281DRAFT_05358 at 111.156 kb on - strand, within H281DRAFT_05358 at 111.203 kb on + strand, within H281DRAFT_05358 at 111.204 kb on - strand, within H281DRAFT_05358 at 111.204 kb on - strand, within H281DRAFT_05358 at 111.204 kb on - strand, within H281DRAFT_05358 at 111.204 kb on - strand, within H281DRAFT_05358 at 111.267 kb on + strand, within H281DRAFT_05358 at 111.389 kb on + strand, within H281DRAFT_05358 at 111.470 kb on + strand, within H281DRAFT_05358 at 111.470 kb on + strand, within H281DRAFT_05358 at 111.471 kb on - strand, within H281DRAFT_05358 at 111.471 kb on - strand, within H281DRAFT_05358 at 111.473 kb on - strand, within H281DRAFT_05358 at 111.720 kb on - strand, within H281DRAFT_05358 at 111.735 kb on + strand, within H281DRAFT_05358 at 111.758 kb on + strand, within H281DRAFT_05358 at 111.759 kb on - strand, within H281DRAFT_05358 at 111.823 kb on + strand, within H281DRAFT_05358 at 111.891 kb on + strand, within H281DRAFT_05358 at 111.956 kb on + strand, within H281DRAFT_05358 at 112.106 kb on + strand, within H281DRAFT_05358 at 112.107 kb on - strand, within H281DRAFT_05358 at 112.241 kb on + strand at 112.242 kb on - strand at 112.242 kb on - strand at 112.323 kb on - strand at 112.323 kb on - strand at 112.381 kb on + strand at 112.381 kb on + strand at 112.494 kb on + strand, within H281DRAFT_05359 at 112.495 kb on - strand, within H281DRAFT_05359 at 112.495 kb on - strand, within H281DRAFT_05359 at 112.495 kb on - strand, within H281DRAFT_05359 at 112.674 kb on + strand, within H281DRAFT_05359 at 112.674 kb on + strand, within H281DRAFT_05359 at 112.704 kb on + strand, within H281DRAFT_05359 at 112.704 kb on + strand, within H281DRAFT_05359 at 112.704 kb on + strand, within H281DRAFT_05359 at 112.704 kb on + strand, within H281DRAFT_05359 at 112.705 kb on - strand, within H281DRAFT_05359 at 112.705 kb on - strand, within H281DRAFT_05359 at 112.705 kb on - strand, within H281DRAFT_05359 at 112.705 kb on - strand, within H281DRAFT_05359 at 112.705 kb on - strand, within H281DRAFT_05359 at 112.705 kb on - strand, within H281DRAFT_05359 at 112.705 kb on - strand, within H281DRAFT_05359 at 112.705 kb on - strand, within H281DRAFT_05359 at 112.795 kb on - strand, within H281DRAFT_05359 at 112.935 kb on + strand, within H281DRAFT_05359 at 112.936 kb on - strand, within H281DRAFT_05359 at 112.936 kb on - strand, within H281DRAFT_05359 at 113.077 kb on - strand, within H281DRAFT_05359 at 113.077 kb on - strand, within H281DRAFT_05359 at 113.106 kb on + strand at 113.107 kb on - strand at 113.172 kb on + strand at 113.231 kb on + strand at 113.231 kb on + strand at 113.231 kb on + strand at 113.231 kb on + strand at 113.231 kb on + strand at 113.232 kb on - strand at 113.232 kb on - strand at 113.232 kb on - strand at 113.232 kb on - strand at 113.267 kb on + strand at 113.268 kb on - strand at 113.297 kb on + strand at 113.298 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 109,952 - H281DRAFT_05357 0.49 +0.1 110,123 - H281DRAFT_05357 0.67 +0.1 110,497 + +0.4 110,529 - +0.2 110,532 + +0.6 110,533 - +0.3 110,609 + +0.4 110,610 - +0.5 110,666 + +0.0 110,842 + -0.7 110,945 + -0.4 110,945 + -0.5 110,945 + -0.7 110,945 + -0.5 110,945 + +0.1 110,946 - -1.0 110,946 - -0.6 110,946 - +0.1 111,026 + H281DRAFT_05358 0.12 +0.0 111,123 - H281DRAFT_05358 0.19 -0.6 111,155 + H281DRAFT_05358 0.21 +0.3 111,156 - H281DRAFT_05358 0.21 -0.6 111,203 + H281DRAFT_05358 0.24 -0.2 111,204 - H281DRAFT_05358 0.24 +0.1 111,204 - H281DRAFT_05358 0.24 -0.9 111,204 - H281DRAFT_05358 0.24 -0.4 111,204 - H281DRAFT_05358 0.24 -0.5 111,267 + H281DRAFT_05358 0.29 -0.0 111,389 + H281DRAFT_05358 0.37 -0.2 111,470 + H281DRAFT_05358 0.42 -0.4 111,470 + H281DRAFT_05358 0.42 +0.2 111,471 - H281DRAFT_05358 0.42 -0.1 111,471 - H281DRAFT_05358 0.42 -1.1 111,473 - H281DRAFT_05358 0.43 -0.5 111,720 - H281DRAFT_05358 0.59 -0.4 111,735 + H281DRAFT_05358 0.60 -0.7 111,758 + H281DRAFT_05358 0.62 -0.7 111,759 - H281DRAFT_05358 0.62 +0.3 111,823 + H281DRAFT_05358 0.66 -0.2 111,891 + H281DRAFT_05358 0.71 -0.8 111,956 + H281DRAFT_05358 0.75 +0.3 112,106 + H281DRAFT_05358 0.85 +0.1 112,107 - H281DRAFT_05358 0.85 -0.2 112,241 + +1.5 112,242 - +0.2 112,242 - +0.3 112,323 - +0.5 112,323 - +0.0 112,381 + -0.6 112,381 + -0.1 112,494 + H281DRAFT_05359 0.12 +0.6 112,495 - H281DRAFT_05359 0.12 +0.0 112,495 - H281DRAFT_05359 0.12 -0.1 112,495 - H281DRAFT_05359 0.12 -0.9 112,674 + H281DRAFT_05359 0.35 +1.0 112,674 + H281DRAFT_05359 0.35 +0.1 112,704 + H281DRAFT_05359 0.39 +0.0 112,704 + H281DRAFT_05359 0.39 -0.4 112,704 + H281DRAFT_05359 0.39 +0.4 112,704 + H281DRAFT_05359 0.39 +0.1 112,705 - H281DRAFT_05359 0.39 +0.2 112,705 - H281DRAFT_05359 0.39 -0.2 112,705 - H281DRAFT_05359 0.39 +0.1 112,705 - H281DRAFT_05359 0.39 +0.2 112,705 - H281DRAFT_05359 0.39 -0.3 112,705 - H281DRAFT_05359 0.39 +0.2 112,705 - H281DRAFT_05359 0.39 -0.1 112,705 - H281DRAFT_05359 0.39 +0.3 112,795 - H281DRAFT_05359 0.51 -0.6 112,935 + H281DRAFT_05359 0.69 +0.6 112,936 - H281DRAFT_05359 0.69 -0.4 112,936 - H281DRAFT_05359 0.69 +0.7 113,077 - H281DRAFT_05359 0.87 -0.3 113,077 - H281DRAFT_05359 0.87 -0.1 113,106 + -0.3 113,107 - +0.2 113,172 + -0.0 113,231 + -0.3 113,231 + -0.2 113,231 + +0.4 113,231 + +0.6 113,231 + -2.1 113,232 - +0.0 113,232 - -0.0 113,232 - -0.1 113,232 - -0.0 113,267 + +0.1 113,268 - -0.3 113,297 + -0.5 113,298 - -0.3
Or see this region's nucleotide sequence