Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_01488

Experiment: D-Glucose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_01487 and H281DRAFT_01488 are separated by 565 nucleotidesH281DRAFT_01488 and H281DRAFT_01489 are separated by 138 nucleotidesH281DRAFT_01489 and H281DRAFT_01490 are separated by 50 nucleotides H281DRAFT_01487: H281DRAFT_01487 - hypothetical protein, at 355,919 to 356,695 _01487 H281DRAFT_01488: H281DRAFT_01488 - hypothetical protein, at 357,261 to 358,073 _01488 H281DRAFT_01489: H281DRAFT_01489 - hypothetical protein, at 358,212 to 358,976 _01489 H281DRAFT_01490: H281DRAFT_01490 - Uncharacterized conserved protein, at 359,027 to 360,067 _01490 Position (kb) 357 358 359Strain fitness (log2 ratio) -1 0 1at 356.490 kb on - strand, within H281DRAFT_01487at 356.834 kb on - strandat 356.834 kb on - strandat 356.952 kb on - strandat 357.017 kb on - strandat 357.069 kb on - strandat 357.171 kb on + strandat 357.477 kb on - strand, within H281DRAFT_01488at 357.777 kb on - strand, within H281DRAFT_01488at 357.945 kb on - strand, within H281DRAFT_01488at 358.403 kb on + strand, within H281DRAFT_01489at 358.537 kb on - strand, within H281DRAFT_01489at 358.706 kb on - strand, within H281DRAFT_01489at 358.870 kb on + strand, within H281DRAFT_01489at 359.042 kb on + strandat 359.051 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C)
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356,490 - H281DRAFT_01487 0.73 -1.1
356,834 - -0.2
356,834 - -0.2
356,952 - -0.0
357,017 - +0.1
357,069 - +0.7
357,171 + -0.2
357,477 - H281DRAFT_01488 0.27 +0.1
357,777 - H281DRAFT_01488 0.63 +0.4
357,945 - H281DRAFT_01488 0.84 +0.9
358,403 + H281DRAFT_01489 0.25 +0.2
358,537 - H281DRAFT_01489 0.42 +0.1
358,706 - H281DRAFT_01489 0.65 +0.9
358,870 + H281DRAFT_01489 0.86 +0.3
359,042 + +0.1
359,051 - -0.0

Or see this region's nucleotide sequence