Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01443 and H281DRAFT_01444 are separated by 92 nucleotides H281DRAFT_01444 and H281DRAFT_01445 are separated by 211 nucleotides H281DRAFT_01445 and H281DRAFT_01446 are separated by 172 nucleotides
H281DRAFT_01443: H281DRAFT_01443 - RND family efflux transporter, MFP subunit, at 303,325 to 304,548
_01443
H281DRAFT_01444: H281DRAFT_01444 - Multidrug efflux pump subunit AcrB, at 304,641 to 307,829
_01444
H281DRAFT_01445: H281DRAFT_01445 - hypothetical protein, at 308,041 to 308,475
_01445
H281DRAFT_01446: H281DRAFT_01446 - transcriptional regulator, LysR family, at 308,648 to 309,523
_01446
Position (kb) 304
305
306
307
308 Strain fitness (log2 ratio) -1
0
1 at 303.779 kb on + strand, within H281DRAFT_01443 at 304.396 kb on + strand, within H281DRAFT_01443 at 304.556 kb on - strand at 304.573 kb on - strand at 305.506 kb on + strand, within H281DRAFT_01444 at 305.770 kb on - strand, within H281DRAFT_01444 at 306.262 kb on + strand, within H281DRAFT_01444 at 306.263 kb on - strand, within H281DRAFT_01444 at 306.507 kb on - strand, within H281DRAFT_01444 at 306.811 kb on - strand at 307.067 kb on - strand, within H281DRAFT_01444 at 307.679 kb on - strand at 307.795 kb on + strand at 308.607 kb on + strand at 308.607 kb on + strand at 308.609 kb on + strand at 308.609 kb on + strand at 308.610 kb on - strand at 308.688 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 303,779 + H281DRAFT_01443 0.37 -0.3 304,396 + H281DRAFT_01443 0.88 -0.3 304,556 - +0.4 304,573 - +0.8 305,506 + H281DRAFT_01444 0.27 -0.4 305,770 - H281DRAFT_01444 0.35 +0.6 306,262 + H281DRAFT_01444 0.51 +1.2 306,263 - H281DRAFT_01444 0.51 -0.0 306,507 - H281DRAFT_01444 0.59 +0.5 306,811 - +1.0 307,067 - H281DRAFT_01444 0.76 +0.7 307,679 - +1.0 307,795 + +0.4 308,607 + +0.7 308,607 + -0.1 308,609 + +0.8 308,609 + +0.5 308,610 - +0.4 308,688 - -0.6
Or see this region's nucleotide sequence