Experiment: D-Glucose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01153 and H281DRAFT_01154 are separated by 111 nucleotides H281DRAFT_01154 and H281DRAFT_01155 are separated by 325 nucleotides H281DRAFT_01155 and H281DRAFT_01156 are separated by 108 nucleotides H281DRAFT_01156 and H281DRAFT_01157 are separated by 41 nucleotides
H281DRAFT_01153: H281DRAFT_01153 - hypothetical protein, at 1,303,280 to 1,303,660
_01153
H281DRAFT_01154: H281DRAFT_01154 - cold-shock DNA-binding protein family, at 1,303,772 to 1,303,975
_01154
H281DRAFT_01155: H281DRAFT_01155 - 2,5-dioxopentanoate dehydrogenase (NAD+), at 1,304,301 to 1,305,746
_01155
H281DRAFT_01156: H281DRAFT_01156 - Protein N-acetyltransferase, RimJ/RimL family, at 1,305,855 to 1,306,433
_01156
H281DRAFT_01157: H281DRAFT_01157 - 2-keto-3-deoxygluconate permease, at 1,306,475 to 1,307,491
_01157
Position (kb)
1304
1305
1306 Strain fitness (log2 ratio)
-1
0
1 at 1303.412 kb on - strand, within H281DRAFT_01153 at 1303.609 kb on - strand, within H281DRAFT_01153 at 1304.202 kb on + strand at 1304.203 kb on - strand at 1304.288 kb on + strand at 1304.318 kb on + strand at 1304.318 kb on + strand at 1304.526 kb on - strand, within H281DRAFT_01155 at 1305.708 kb on + strand at 1305.744 kb on + strand at 1305.782 kb on + strand at 1305.789 kb on - strand at 1305.855 kb on - strand at 1305.855 kb on - strand at 1306.001 kb on + strand, within H281DRAFT_01156 at 1306.147 kb on + strand, within H281DRAFT_01156 at 1306.179 kb on - strand, within H281DRAFT_01156 at 1306.347 kb on - strand, within H281DRAFT_01156 at 1306.452 kb on + strand at 1306.452 kb on + strand at 1306.487 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C) remove 1,303,412 - H281DRAFT_01153 0.35 -0.4 1,303,609 - H281DRAFT_01153 0.86 +0.1 1,304,202 + -1.7 1,304,203 - +0.8 1,304,288 + +0.2 1,304,318 + -0.1 1,304,318 + +0.2 1,304,526 - H281DRAFT_01155 0.16 -1.1 1,305,708 + -0.1 1,305,744 + +1.0 1,305,782 + +0.0 1,305,789 - -0.2 1,305,855 - -0.1 1,305,855 - +0.2 1,306,001 + H281DRAFT_01156 0.25 -0.9 1,306,147 + H281DRAFT_01156 0.50 -0.7 1,306,179 - H281DRAFT_01156 0.56 +0.2 1,306,347 - H281DRAFT_01156 0.85 +0.3 1,306,452 + +0.1 1,306,452 + +0.2 1,306,487 - -0.7
Or see this region's nucleotide sequence