Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06068 and H281DRAFT_06069 overlap by 11 nucleotides H281DRAFT_06069 and H281DRAFT_06070 overlap by 4 nucleotides H281DRAFT_06070 and H281DRAFT_06071 are separated by 140 nucleotides
H281DRAFT_06068: H281DRAFT_06068 - phosphoribosylanthranilate isomerase, at 82,979 to 83,704
_06068
H281DRAFT_06069: H281DRAFT_06069 - tRNA pseudouridine38-40 synthase, at 83,694 to 84,512
_06069
H281DRAFT_06070: H281DRAFT_06070 - FimV C-terminal domain-containing protein, at 84,509 to 86,827
_06070
H281DRAFT_06071: H281DRAFT_06071 - aspartate semialdehyde dehydrogenase, at 86,968 to 88,089
_06071
Position (kb) 84
85
86
87 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3 at 83.571 kb on - strand, within H281DRAFT_06068 at 83.724 kb on + strand at 83.725 kb on - strand at 83.730 kb on - strand at 83.800 kb on + strand, within H281DRAFT_06069 at 83.801 kb on - strand, within H281DRAFT_06069 at 83.900 kb on - strand at 84.103 kb on - strand, within H281DRAFT_06069 at 84.178 kb on + strand, within H281DRAFT_06069 at 84.179 kb on - strand, within H281DRAFT_06069 at 84.179 kb on - strand, within H281DRAFT_06069 at 84.184 kb on + strand, within H281DRAFT_06069 at 84.185 kb on - strand at 84.185 kb on - strand, within H281DRAFT_06069 at 84.185 kb on - strand, within H281DRAFT_06069 at 84.185 kb on - strand, within H281DRAFT_06069 at 84.185 kb on - strand, within H281DRAFT_06069 at 84.485 kb on - strand at 84.631 kb on - strand at 84.631 kb on - strand at 85.566 kb on - strand, within H281DRAFT_06070 at 85.746 kb on - strand, within H281DRAFT_06070 at 86.885 kb on - strand at 86.885 kb on - strand at 86.959 kb on + strand at 86.964 kb on + strand at 86.964 kb on + strand at 86.970 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 83,571 - H281DRAFT_06068 0.82 -5.1 83,724 + -1.0 83,725 - -0.2 83,730 - -0.7 83,800 + H281DRAFT_06069 0.13 -0.8 83,801 - H281DRAFT_06069 0.13 +0.5 83,900 - -1.1 84,103 - H281DRAFT_06069 0.50 -0.1 84,178 + H281DRAFT_06069 0.59 +2.2 84,179 - H281DRAFT_06069 0.59 +0.1 84,179 - H281DRAFT_06069 0.59 +0.5 84,184 + H281DRAFT_06069 0.60 -1.4 84,185 - +3.0 84,185 - H281DRAFT_06069 0.60 +0.3 84,185 - H281DRAFT_06069 0.60 -0.7 84,185 - H281DRAFT_06069 0.60 +0.3 84,185 - H281DRAFT_06069 0.60 +0.3 84,485 - +0.3 84,631 - +0.9 84,631 - -0.2 85,566 - H281DRAFT_06070 0.46 +0.9 85,746 - H281DRAFT_06070 0.53 +0.6 86,885 - -0.2 86,885 - -0.2 86,959 + +0.0 86,964 + +0.5 86,964 + -1.0 86,970 - +0.0
Or see this region's nucleotide sequence