Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04929 and H281DRAFT_04930 are separated by 215 nucleotides H281DRAFT_04930 and H281DRAFT_04931 are separated by 100 nucleotides H281DRAFT_04931 and H281DRAFT_04932 are separated by 18 nucleotides
H281DRAFT_04929: H281DRAFT_04929 - hypothetical protein, at 111,262 to 112,164
_04929
H281DRAFT_04930: H281DRAFT_04930 - Cupin domain, at 112,380 to 113,816
_04930
H281DRAFT_04931: H281DRAFT_04931 - Surfactin synthase thioesterase subunit, at 113,917 to 114,735
_04931
H281DRAFT_04932: H281DRAFT_04932 - MbtH protein, at 114,754 to 114,987
_04932
Position (kb) 112
113
114 Strain fitness (log2 ratio) -1
0
1 at 111.704 kb on + strand, within H281DRAFT_04929 at 111.859 kb on - strand, within H281DRAFT_04929 at 111.872 kb on + strand, within H281DRAFT_04929 at 112.323 kb on - strand at 113.042 kb on - strand, within H281DRAFT_04930 at 113.077 kb on + strand, within H281DRAFT_04930 at 113.325 kb on - strand, within H281DRAFT_04930 at 113.431 kb on + strand, within H281DRAFT_04930 at 113.431 kb on + strand, within H281DRAFT_04930 at 113.475 kb on - strand, within H281DRAFT_04930 at 113.555 kb on - strand, within H281DRAFT_04930 at 113.756 kb on - strand at 114.089 kb on - strand, within H281DRAFT_04931 at 114.201 kb on + strand, within H281DRAFT_04931 at 114.201 kb on + strand, within H281DRAFT_04931
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 111,704 + H281DRAFT_04929 0.49 +0.7 111,859 - H281DRAFT_04929 0.66 -0.4 111,872 + H281DRAFT_04929 0.68 +0.1 112,323 - +0.2 113,042 - H281DRAFT_04930 0.46 +0.5 113,077 + H281DRAFT_04930 0.49 -0.8 113,325 - H281DRAFT_04930 0.66 +0.2 113,431 + H281DRAFT_04930 0.73 -0.1 113,431 + H281DRAFT_04930 0.73 -1.1 113,475 - H281DRAFT_04930 0.76 +1.0 113,555 - H281DRAFT_04930 0.82 +0.8 113,756 - +0.1 114,089 - H281DRAFT_04931 0.21 -0.4 114,201 + H281DRAFT_04931 0.35 +0.2 114,201 + H281DRAFT_04931 0.35 -0.1
Or see this region's nucleotide sequence