Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04625 and H281DRAFT_04626 are separated by 76 nucleotides H281DRAFT_04626 and H281DRAFT_04627 are separated by 132 nucleotides H281DRAFT_04627 and H281DRAFT_04628 are separated by 8 nucleotides
H281DRAFT_04625: H281DRAFT_04625 - 3-hydroxyacyl-CoA dehydrogenase, at 20,306 to 22,741
_04625
H281DRAFT_04626: H281DRAFT_04626 - acetyl-CoA acyltransferase, at 22,818 to 24,017
_04626
H281DRAFT_04627: H281DRAFT_04627 - Enoyl-CoA hydratase, at 24,150 to 24,920
_04627
H281DRAFT_04628: H281DRAFT_04628 - FdhD protein, at 24,929 to 25,768
_04628
Position (kb)
22
23
24
25 Strain fitness (log2 ratio)
-1
0
1 at 21.846 kb on + strand, within H281DRAFT_04625 at 21.847 kb on - strand, within H281DRAFT_04625 at 21.847 kb on - strand, within H281DRAFT_04625 at 21.888 kb on - strand, within H281DRAFT_04625 at 22.125 kb on + strand, within H281DRAFT_04625 at 22.125 kb on + strand, within H281DRAFT_04625 at 22.126 kb on - strand, within H281DRAFT_04625 at 22.126 kb on - strand, within H281DRAFT_04625 at 22.129 kb on + strand, within H281DRAFT_04625 at 22.129 kb on + strand, within H281DRAFT_04625 at 22.160 kb on + strand, within H281DRAFT_04625 at 22.160 kb on + strand, within H281DRAFT_04625 at 22.160 kb on + strand, within H281DRAFT_04625 at 22.161 kb on - strand, within H281DRAFT_04625 at 22.161 kb on - strand, within H281DRAFT_04625 at 22.756 kb on + strand at 22.756 kb on + strand at 22.757 kb on - strand at 22.778 kb on - strand at 22.778 kb on - strand at 22.842 kb on + strand at 22.842 kb on + strand at 22.842 kb on + strand at 22.842 kb on + strand at 22.901 kb on + strand at 22.902 kb on - strand at 22.902 kb on - strand at 23.237 kb on + strand, within H281DRAFT_04626 at 23.238 kb on - strand, within H281DRAFT_04626 at 23.238 kb on - strand, within H281DRAFT_04626 at 23.413 kb on - strand, within H281DRAFT_04626 at 23.505 kb on - strand, within H281DRAFT_04626 at 23.946 kb on + strand at 23.946 kb on + strand at 23.946 kb on + strand at 23.946 kb on + strand at 23.947 kb on - strand at 23.947 kb on - strand at 23.952 kb on + strand at 23.953 kb on - strand at 24.037 kb on - strand at 24.501 kb on + strand, within H281DRAFT_04627 at 24.501 kb on + strand, within H281DRAFT_04627 at 24.502 kb on - strand, within H281DRAFT_04627 at 24.502 kb on - strand, within H281DRAFT_04627 at 24.502 kb on - strand, within H281DRAFT_04627 at 24.958 kb on - strand at 24.966 kb on + strand at 24.966 kb on + strand at 24.967 kb on - strand at 24.967 kb on - strand at 24.967 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 21,846 + H281DRAFT_04625 0.63 +1.0 21,847 - H281DRAFT_04625 0.63 -1.0 21,847 - H281DRAFT_04625 0.63 -0.3 21,888 - H281DRAFT_04625 0.65 +0.1 22,125 + H281DRAFT_04625 0.75 +0.2 22,125 + H281DRAFT_04625 0.75 -1.6 22,126 - H281DRAFT_04625 0.75 -0.5 22,126 - H281DRAFT_04625 0.75 -0.1 22,129 + H281DRAFT_04625 0.75 +1.0 22,129 + H281DRAFT_04625 0.75 -0.1 22,160 + H281DRAFT_04625 0.76 +0.6 22,160 + H281DRAFT_04625 0.76 -0.0 22,160 + H281DRAFT_04625 0.76 +0.2 22,161 - H281DRAFT_04625 0.76 -0.3 22,161 - H281DRAFT_04625 0.76 -0.9 22,756 + +0.7 22,756 + +0.1 22,757 - +0.3 22,778 - +0.6 22,778 - -0.5 22,842 + -0.6 22,842 + -0.5 22,842 + +0.0 22,842 + -0.2 22,901 + -0.2 22,902 - +0.6 22,902 - -1.2 23,237 + H281DRAFT_04626 0.35 +1.1 23,238 - H281DRAFT_04626 0.35 +1.0 23,238 - H281DRAFT_04626 0.35 +0.2 23,413 - H281DRAFT_04626 0.50 +0.3 23,505 - H281DRAFT_04626 0.57 -0.0 23,946 + -0.1 23,946 + +0.0 23,946 + -0.4 23,946 + +0.2 23,947 - +0.4 23,947 - +0.6 23,952 + -0.2 23,953 - +0.1 24,037 - +0.4 24,501 + H281DRAFT_04627 0.46 -0.7 24,501 + H281DRAFT_04627 0.46 -0.3 24,502 - H281DRAFT_04627 0.46 +0.5 24,502 - H281DRAFT_04627 0.46 -1.0 24,502 - H281DRAFT_04627 0.46 +0.7 24,958 - -0.1 24,966 + +0.0 24,966 + -0.4 24,967 - +0.2 24,967 - +0.0 24,967 - +1.0
Or see this region's nucleotide sequence