Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03500 and H281DRAFT_03501 overlap by 23 nucleotides H281DRAFT_03501 and H281DRAFT_03502 overlap by 11 nucleotides H281DRAFT_03502 and H281DRAFT_03503 are separated by 85 nucleotides H281DRAFT_03503 and H281DRAFT_03504 are separated by 97 nucleotides
H281DRAFT_03500: H281DRAFT_03500 - 2-aminoethylphosphonate transport system ATP-binding protein, at 584,518 to 585,618
_03500
H281DRAFT_03501: H281DRAFT_03501 - 2-aminoethylphosphonate transport system permease protein, at 585,596 to 586,543
_03501
H281DRAFT_03502: H281DRAFT_03502 - 2-aminoethylphosphonate transport system permease protein, at 586,533 to 587,396
_03502
H281DRAFT_03503: H281DRAFT_03503 - transcriptional regulator, GntR family, at 587,482 to 588,228
_03503
H281DRAFT_03504: H281DRAFT_03504 - phosphonoacetate hydrolase, at 588,326 to 589,603
_03504
Position (kb) 586
587
588 Strain fitness (log2 ratio) -1
0
1 at 585.607 kb on - strand at 585.770 kb on + strand, within H281DRAFT_03501 at 586.403 kb on + strand, within H281DRAFT_03501 at 586.484 kb on + strand at 586.485 kb on - strand at 586.494 kb on - strand at 586.518 kb on + strand at 586.968 kb on + strand, within H281DRAFT_03502 at 587.298 kb on + strand, within H281DRAFT_03502 at 587.454 kb on + strand at 587.577 kb on + strand, within H281DRAFT_03503 at 587.962 kb on + strand, within H281DRAFT_03503 at 587.962 kb on + strand, within H281DRAFT_03503 at 587.972 kb on - strand, within H281DRAFT_03503 at 588.306 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 585,607 - +0.4 585,770 + H281DRAFT_03501 0.18 -0.2 586,403 + H281DRAFT_03501 0.85 -0.3 586,484 + +0.1 586,485 - -0.1 586,494 - +0.1 586,518 + +1.2 586,968 + H281DRAFT_03502 0.50 +0.6 587,298 + H281DRAFT_03502 0.89 +0.5 587,454 + +0.6 587,577 + H281DRAFT_03503 0.13 +0.2 587,962 + H281DRAFT_03503 0.64 -0.4 587,962 + H281DRAFT_03503 0.64 -0.4 587,972 - H281DRAFT_03503 0.66 -0.1 588,306 - +0.6
Or see this region's nucleotide sequence