Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03307 and H281DRAFT_03308 overlap by 28 nucleotides H281DRAFT_03308 and H281DRAFT_03309 are separated by 12 nucleotides H281DRAFT_03309 and H281DRAFT_03310 overlap by 4 nucleotides H281DRAFT_03310 and H281DRAFT_03311 overlap by 4 nucleotides
H281DRAFT_03307: H281DRAFT_03307 - Cytochrome c oxidase assembly factor CtaG, at 370,114 to 371,082
_03307
H281DRAFT_03308: H281DRAFT_03308 - hypothetical protein, at 371,055 to 371,387
_03308
H281DRAFT_03309: H281DRAFT_03309 - Heme/copper-type cytochrome/quinol oxidase, subunit 3, at 371,400 to 372,050
_03309
H281DRAFT_03310: H281DRAFT_03310 - cytochrome c oxidase subunit 1, at 372,047 to 373,996
_03310
H281DRAFT_03311: H281DRAFT_03311 - cytochrome c oxidase subunit 2, at 373,993 to 375,114
_03311
Position (kb) 372
373
374 Strain fitness (log2 ratio) -2
-1
0
1 at 371.076 kb on - strand at 371.323 kb on + strand, within H281DRAFT_03308 at 371.324 kb on - strand, within H281DRAFT_03308 at 371.419 kb on + strand at 371.431 kb on + strand at 371.452 kb on - strand at 371.861 kb on - strand, within H281DRAFT_03309 at 371.866 kb on + strand, within H281DRAFT_03309 at 372.272 kb on - strand, within H281DRAFT_03310 at 372.759 kb on + strand, within H281DRAFT_03310 at 372.760 kb on - strand, within H281DRAFT_03310 at 372.784 kb on - strand, within H281DRAFT_03310 at 372.794 kb on + strand, within H281DRAFT_03310 at 372.980 kb on - strand, within H281DRAFT_03310 at 373.162 kb on - strand, within H281DRAFT_03310 at 373.191 kb on - strand, within H281DRAFT_03310 at 373.208 kb on + strand, within H281DRAFT_03310 at 373.208 kb on + strand, within H281DRAFT_03310 at 373.729 kb on - strand, within H281DRAFT_03310 at 373.730 kb on + strand, within H281DRAFT_03310 at 374.493 kb on + strand, within H281DRAFT_03311
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 371,076 - -0.2 371,323 + H281DRAFT_03308 0.80 +0.9 371,324 - H281DRAFT_03308 0.81 -1.8 371,419 + -0.2 371,431 + -0.3 371,452 - +1.0 371,861 - H281DRAFT_03309 0.71 +0.5 371,866 + H281DRAFT_03309 0.72 -0.3 372,272 - H281DRAFT_03310 0.12 +0.7 372,759 + H281DRAFT_03310 0.37 -0.1 372,760 - H281DRAFT_03310 0.37 +1.6 372,784 - H281DRAFT_03310 0.38 -0.2 372,794 + H281DRAFT_03310 0.38 +0.7 372,980 - H281DRAFT_03310 0.48 +0.5 373,162 - H281DRAFT_03310 0.57 -1.2 373,191 - H281DRAFT_03310 0.59 +0.8 373,208 + H281DRAFT_03310 0.60 +0.7 373,208 + H281DRAFT_03310 0.60 +0.4 373,729 - H281DRAFT_03310 0.86 -0.2 373,730 + H281DRAFT_03310 0.86 +1.0 374,493 + H281DRAFT_03311 0.45 -0.2
Or see this region's nucleotide sequence