Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02904 and H281DRAFT_02905 overlap by 4 nucleotides H281DRAFT_02905 and H281DRAFT_02906 are separated by 141 nucleotides H281DRAFT_02906 and H281DRAFT_02907 are separated by 130 nucleotides
H281DRAFT_02904: H281DRAFT_02904 - L-lactate dehydrogenase complex protein LldF, at 512,207 to 513,598
_02904
H281DRAFT_02905: H281DRAFT_02905 - L-lactate dehydrogenase complex protein LldE, at 513,595 to 514,338
_02905
H281DRAFT_02906: H281DRAFT_02906 - transcriptional regulator, GntR family, at 514,480 to 515,208
_02906
H281DRAFT_02907: H281DRAFT_02907 - arginine:pyruvate transaminase, at 515,339 to 516,526
_02907
Position (kb) 514
515
516 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 513.627 kb on + strand at 514.128 kb on - strand, within H281DRAFT_02905 at 514.426 kb on + strand at 514.584 kb on - strand, within H281DRAFT_02906 at 514.859 kb on + strand, within H281DRAFT_02906 at 514.861 kb on + strand, within H281DRAFT_02906 at 514.862 kb on - strand, within H281DRAFT_02906 at 514.862 kb on - strand, within H281DRAFT_02906 at 515.012 kb on + strand, within H281DRAFT_02906 at 515.276 kb on + strand at 515.296 kb on - strand at 515.298 kb on - strand at 515.640 kb on + strand, within H281DRAFT_02907 at 515.640 kb on + strand, within H281DRAFT_02907 at 515.640 kb on + strand, within H281DRAFT_02907 at 515.641 kb on - strand, within H281DRAFT_02907 at 515.725 kb on - strand, within H281DRAFT_02907 at 516.142 kb on - strand, within H281DRAFT_02907 at 516.150 kb on + strand, within H281DRAFT_02907
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 513,627 + -2.4 514,128 - H281DRAFT_02905 0.72 -3.3 514,426 + -1.5 514,584 - H281DRAFT_02906 0.14 -0.5 514,859 + H281DRAFT_02906 0.52 -0.6 514,861 + H281DRAFT_02906 0.52 +0.8 514,862 - H281DRAFT_02906 0.52 +0.5 514,862 - H281DRAFT_02906 0.52 +0.3 515,012 + H281DRAFT_02906 0.73 +0.6 515,276 + +0.1 515,296 - -0.3 515,298 - -0.4 515,640 + H281DRAFT_02907 0.25 +0.5 515,640 + H281DRAFT_02907 0.25 +0.4 515,640 + H281DRAFT_02907 0.25 +0.4 515,641 - H281DRAFT_02907 0.25 -0.6 515,725 - H281DRAFT_02907 0.32 -0.5 516,142 - H281DRAFT_02907 0.68 -0.2 516,150 + H281DRAFT_02907 0.68 +0.2
Or see this region's nucleotide sequence