Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02845 and H281DRAFT_02846 are separated by 42 nucleotides H281DRAFT_02846 and H281DRAFT_02847 are separated by 3 nucleotides H281DRAFT_02847 and H281DRAFT_02848 are separated by 0 nucleotides H281DRAFT_02848 and H281DRAFT_02849 are separated by 195 nucleotides
H281DRAFT_02845: H281DRAFT_02845 - glutathione S-transferase, at 439,637 to 440,272
_02845
H281DRAFT_02846: H281DRAFT_02846 - Uncharacterized conserved protein YndB, AHSA1/START domain, at 440,315 to 440,761
_02846
H281DRAFT_02847: H281DRAFT_02847 - transcriptional regulator, ArsR family, at 440,765 to 441,097
_02847
H281DRAFT_02848: H281DRAFT_02848 - Fe-S-cluster containining protein, at 441,098 to 442,000
_02848
H281DRAFT_02849: H281DRAFT_02849 - Pimeloyl-ACP methyl ester carboxylesterase, at 442,196 to 443,350
_02849
Position (kb) 441
442
443 Strain fitness (log2 ratio) -1
0
1 at 440.149 kb on - strand, within H281DRAFT_02845 at 440.527 kb on + strand, within H281DRAFT_02846 at 440.745 kb on - strand at 441.047 kb on + strand, within H281DRAFT_02847 at 441.148 kb on - strand at 441.404 kb on - strand, within H281DRAFT_02848 at 441.687 kb on + strand, within H281DRAFT_02848 at 442.129 kb on + strand at 442.197 kb on + strand at 442.432 kb on - strand, within H281DRAFT_02849 at 442.471 kb on - strand, within H281DRAFT_02849 at 442.479 kb on - strand, within H281DRAFT_02849
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 440,149 - H281DRAFT_02845 0.81 +0.3 440,527 + H281DRAFT_02846 0.47 -0.1 440,745 - +0.2 441,047 + H281DRAFT_02847 0.85 -0.3 441,148 - +0.1 441,404 - H281DRAFT_02848 0.34 +0.3 441,687 + H281DRAFT_02848 0.65 +0.4 442,129 + -0.1 442,197 + -0.1 442,432 - H281DRAFT_02849 0.20 +0.5 442,471 - H281DRAFT_02849 0.24 -0.9 442,479 - H281DRAFT_02849 0.25 +0.3
Or see this region's nucleotide sequence