Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02690 and H281DRAFT_02691 are separated by 15 nucleotides H281DRAFT_02691 and H281DRAFT_02692 are separated by 536 nucleotides H281DRAFT_02692 and H281DRAFT_02693 are separated by 78 nucleotides H281DRAFT_02693 and H281DRAFT_02694 are separated by 104 nucleotides
H281DRAFT_02690: H281DRAFT_02690 - hypothetical protein, at 272,279 to 272,713
_02690
H281DRAFT_02691: H281DRAFT_02691 - transcriptional regulator, ArsR family, at 272,729 to 273,046
_02691
H281DRAFT_02692: H281DRAFT_02692 - nudix-type nucleoside diphosphatase, YffH/AdpP family, at 273,583 to 274,182
_02692
H281DRAFT_02693: H281DRAFT_02693 - transcriptional regulator, DeoR family, at 274,261 to 275,016
_02693
H281DRAFT_02694: H281DRAFT_02694 - DNA binding domain-containing protein, excisionase family, at 275,121 to 276,368
_02694
Position (kb) 273
274
275 Strain fitness (log2 ratio) -1
0
1 at 272.690 kb on - strand at 272.872 kb on + strand, within H281DRAFT_02691 at 272.873 kb on - strand, within H281DRAFT_02691 at 272.882 kb on + strand, within H281DRAFT_02691 at 273.154 kb on + strand at 273.319 kb on + strand at 273.320 kb on - strand at 273.788 kb on + strand, within H281DRAFT_02692 at 273.887 kb on - strand, within H281DRAFT_02692 at 273.887 kb on - strand, within H281DRAFT_02692 at 274.278 kb on + strand at 274.690 kb on + strand, within H281DRAFT_02693 at 274.691 kb on - strand, within H281DRAFT_02693
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 272,690 - +0.1 272,872 + H281DRAFT_02691 0.45 -0.1 272,873 - H281DRAFT_02691 0.45 +0.5 272,882 + H281DRAFT_02691 0.48 +0.1 273,154 + +0.5 273,319 + +0.9 273,320 - -0.2 273,788 + H281DRAFT_02692 0.34 +1.1 273,887 - H281DRAFT_02692 0.51 +1.5 273,887 - H281DRAFT_02692 0.51 -0.1 274,278 + -0.4 274,690 + H281DRAFT_02693 0.57 +0.1 274,691 - H281DRAFT_02693 0.57 +0.2
Or see this region's nucleotide sequence