Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02638 and H281DRAFT_02639 are separated by 64 nucleotides H281DRAFT_02639 and H281DRAFT_02640 are separated by 43 nucleotides H281DRAFT_02640 and H281DRAFT_02641 overlap by 1 nucleotides H281DRAFT_02641 and H281DRAFT_02642 are separated by 450 nucleotides
H281DRAFT_02638: H281DRAFT_02638 - Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA), at 215,962 to 217,257
_02638
H281DRAFT_02639: H281DRAFT_02639 - Cu and Ag efflux protein CusF, at 217,322 to 217,669
_02639
H281DRAFT_02640: H281DRAFT_02640 - hypothetical protein, at 217,713 to 218,111
_02640
H281DRAFT_02641: H281DRAFT_02641 - putative copper resistance protein D, at 218,111 to 219,052
_02641
H281DRAFT_02642: H281DRAFT_02642 - Glycosyl hydrolase family 63 C-terminal domain-containing protein, at 219,503 to 222,238
_02642
Position (kb) 218
219
220 Strain fitness (log2 ratio) -1
0
1 at 217.232 kb on - strand at 217.808 kb on + strand, within H281DRAFT_02640 at 217.809 kb on - strand, within H281DRAFT_02640 at 217.978 kb on + strand, within H281DRAFT_02640 at 218.092 kb on - strand at 218.093 kb on + strand at 218.109 kb on + strand at 218.658 kb on + strand, within H281DRAFT_02641 at 218.814 kb on - strand, within H281DRAFT_02641 at 219.117 kb on - strand at 219.324 kb on - strand at 219.591 kb on - strand at 219.630 kb on - strand at 219.689 kb on + strand at 219.848 kb on + strand, within H281DRAFT_02642 at 219.848 kb on + strand, within H281DRAFT_02642 at 219.882 kb on - strand, within H281DRAFT_02642 at 219.890 kb on + strand, within H281DRAFT_02642 at 219.891 kb on - strand, within H281DRAFT_02642
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 217,232 - -0.3 217,808 + H281DRAFT_02640 0.24 +0.4 217,809 - H281DRAFT_02640 0.24 -0.1 217,978 + H281DRAFT_02640 0.66 -0.2 218,092 - +0.1 218,093 + -0.2 218,109 + -0.5 218,658 + H281DRAFT_02641 0.58 +0.2 218,814 - H281DRAFT_02641 0.75 +0.5 219,117 - +0.3 219,324 - -0.3 219,591 - -0.2 219,630 - +0.6 219,689 + -0.6 219,848 + H281DRAFT_02642 0.13 +0.6 219,848 + H281DRAFT_02642 0.13 -0.1 219,882 - H281DRAFT_02642 0.14 +0.5 219,890 + H281DRAFT_02642 0.14 +0.1 219,891 - H281DRAFT_02642 0.14 -0.5
Or see this region's nucleotide sequence