Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02486 and H281DRAFT_02487 are separated by 51 nucleotides H281DRAFT_02487 and H281DRAFT_02488 overlap by 4 nucleotides H281DRAFT_02488 and H281DRAFT_02489 are separated by 40 nucleotides
H281DRAFT_02486: H281DRAFT_02486 - oxalate/formate antiporter, at 59,887 to 61,191
_02486
H281DRAFT_02487: H281DRAFT_02487 - NitT/TauT family transport system ATP-binding protein, at 61,243 to 62,019
_02487
H281DRAFT_02488: H281DRAFT_02488 - NitT/TauT family transport system permease protein, at 62,016 to 62,870
_02488
H281DRAFT_02489: H281DRAFT_02489 - NitT/TauT family transport system substrate-binding protein, at 62,911 to 63,891
_02489
Position (kb) 62
63 Strain fitness (log2 ratio) -1
0
1 at 61.269 kb on + strand at 61.270 kb on - strand at 61.598 kb on - strand, within H281DRAFT_02487 at 61.609 kb on + strand, within H281DRAFT_02487 at 61.610 kb on - strand, within H281DRAFT_02487 at 61.811 kb on + strand, within H281DRAFT_02487 at 61.865 kb on + strand, within H281DRAFT_02487 at 61.901 kb on - strand, within H281DRAFT_02487 at 62.039 kb on + strand at 62.149 kb on + strand, within H281DRAFT_02488 at 62.212 kb on + strand, within H281DRAFT_02488 at 62.269 kb on - strand, within H281DRAFT_02488 at 62.508 kb on + strand, within H281DRAFT_02488 at 62.868 kb on + strand at 63.016 kb on - strand, within H281DRAFT_02489 at 63.056 kb on - strand, within H281DRAFT_02489 at 63.065 kb on + strand, within H281DRAFT_02489 at 63.282 kb on - strand, within H281DRAFT_02489 at 63.476 kb on - strand, within H281DRAFT_02489 at 63.638 kb on - strand, within H281DRAFT_02489 at 63.638 kb on - strand, within H281DRAFT_02489 at 63.729 kb on + strand, within H281DRAFT_02489 at 63.730 kb on - strand, within H281DRAFT_02489 at 63.839 kb on - strand at 63.839 kb on - strand at 63.862 kb on + strand at 63.862 kb on + strand at 63.862 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 61,269 + +0.2 61,270 - -0.4 61,598 - H281DRAFT_02487 0.46 -0.1 61,609 + H281DRAFT_02487 0.47 -0.0 61,610 - H281DRAFT_02487 0.47 -0.2 61,811 + H281DRAFT_02487 0.73 +1.0 61,865 + H281DRAFT_02487 0.80 -0.2 61,901 - H281DRAFT_02487 0.85 +0.3 62,039 + -0.2 62,149 + H281DRAFT_02488 0.16 +0.6 62,212 + H281DRAFT_02488 0.23 +0.4 62,269 - H281DRAFT_02488 0.30 +1.6 62,508 + H281DRAFT_02488 0.58 +0.8 62,868 + +0.2 63,016 - H281DRAFT_02489 0.11 -0.4 63,056 - H281DRAFT_02489 0.15 -0.1 63,065 + H281DRAFT_02489 0.16 -0.7 63,282 - H281DRAFT_02489 0.38 -0.2 63,476 - H281DRAFT_02489 0.58 -0.2 63,638 - H281DRAFT_02489 0.74 +0.4 63,638 - H281DRAFT_02489 0.74 -0.7 63,729 + H281DRAFT_02489 0.83 -0.3 63,730 - H281DRAFT_02489 0.83 +0.1 63,839 - -0.2 63,839 - +0.0 63,862 + +0.2 63,862 + -0.4 63,862 + -0.3
Or see this region's nucleotide sequence