Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01686 and H281DRAFT_01687 are separated by 81 nucleotides H281DRAFT_01687 and H281DRAFT_01688 are separated by 116 nucleotides H281DRAFT_01688 and H281DRAFT_01689 are separated by 219 nucleotides
H281DRAFT_01686: H281DRAFT_01686 - Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains, at 569,292 to 570,188
_01686
H281DRAFT_01687: H281DRAFT_01687 - carbonic anhydrase, at 570,270 to 570,812
_01687
H281DRAFT_01688: H281DRAFT_01688 - aliphatic nitrilase, at 570,929 to 571,915
_01688
H281DRAFT_01689: H281DRAFT_01689 - transcriptional regulator, AraC family with amidase-like domain, at 572,135 to 573,091
_01689
Position (kb) 570
571
572 Strain fitness (log2 ratio) -1
0
1 at 569.972 kb on - strand, within H281DRAFT_01686 at 570.172 kb on + strand at 570.173 kb on - strand at 570.675 kb on + strand, within H281DRAFT_01687 at 571.423 kb on - strand, within H281DRAFT_01688 at 571.522 kb on - strand, within H281DRAFT_01688 at 571.759 kb on - strand, within H281DRAFT_01688 at 571.949 kb on - strand at 571.968 kb on + strand at 571.969 kb on - strand at 572.237 kb on + strand, within H281DRAFT_01689 at 572.290 kb on + strand, within H281DRAFT_01689 at 572.783 kb on - strand, within H281DRAFT_01689
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 569,972 - H281DRAFT_01686 0.76 +0.4 570,172 + -0.7 570,173 - -0.0 570,675 + H281DRAFT_01687 0.75 +0.1 571,423 - H281DRAFT_01688 0.50 +0.2 571,522 - H281DRAFT_01688 0.60 +0.4 571,759 - H281DRAFT_01688 0.84 +1.4 571,949 - +0.1 571,968 + -0.4 571,969 - +0.5 572,237 + H281DRAFT_01689 0.11 +0.3 572,290 + H281DRAFT_01689 0.16 +0.5 572,783 - H281DRAFT_01689 0.68 +0.9
Or see this region's nucleotide sequence