Experiment: D,L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01233 and H281DRAFT_01234 are separated by 58 nucleotides H281DRAFT_01234 and H281DRAFT_01235 are separated by 619 nucleotides H281DRAFT_01235 and H281DRAFT_01236 are separated by 28 nucleotides H281DRAFT_01236 and H281DRAFT_01237 are separated by 148 nucleotides
H281DRAFT_01233: H281DRAFT_01233 - hypothetical protein, at 71,722 to 71,994
_01233
H281DRAFT_01234: H281DRAFT_01234 - hypothetical protein, at 72,053 to 72,361
_01234
H281DRAFT_01235: H281DRAFT_01235 - DNA-binding protein H-NS, at 72,981 to 73,307
_01235
H281DRAFT_01236: H281DRAFT_01236 - Protein-tyrosine-phosphatase, at 73,336 to 73,845
_01236
H281DRAFT_01237: H281DRAFT_01237 - DnaJ-class molecular chaperone with C-terminal Zn finger domain, at 73,994 to 74,674
_01237
Position (kb) 72
73
74 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 72.042 kb on + strand at 72.100 kb on + strand, within H281DRAFT_01234 at 72.101 kb on - strand, within H281DRAFT_01234 at 72.148 kb on - strand, within H281DRAFT_01234 at 72.191 kb on + strand, within H281DRAFT_01234 at 72.191 kb on + strand, within H281DRAFT_01234 at 72.191 kb on + strand, within H281DRAFT_01234 at 72.192 kb on - strand, within H281DRAFT_01234 at 72.192 kb on - strand, within H281DRAFT_01234 at 72.409 kb on - strand at 72.463 kb on - strand at 72.608 kb on - strand at 72.608 kb on - strand at 72.608 kb on - strand at 72.608 kb on - strand at 72.610 kb on - strand at 72.658 kb on + strand at 72.659 kb on - strand at 72.659 kb on - strand at 72.714 kb on + strand at 72.715 kb on - strand at 72.715 kb on - strand at 72.748 kb on - strand at 72.761 kb on - strand at 72.796 kb on + strand at 72.872 kb on + strand at 72.872 kb on + strand at 72.899 kb on - strand at 72.964 kb on - strand at 72.964 kb on - strand at 72.973 kb on - strand at 72.976 kb on - strand at 73.002 kb on - strand at 73.002 kb on - strand at 73.072 kb on + strand, within H281DRAFT_01235 at 73.072 kb on + strand, within H281DRAFT_01235 at 73.072 kb on + strand at 73.073 kb on - strand, within H281DRAFT_01235 at 73.073 kb on - strand, within H281DRAFT_01235 at 73.330 kb on + strand at 73.330 kb on + strand at 73.330 kb on + strand at 73.331 kb on - strand at 73.332 kb on + strand at 73.332 kb on + strand at 73.332 kb on + strand at 73.332 kb on + strand at 73.333 kb on - strand at 73.435 kb on + strand, within H281DRAFT_01236 at 73.436 kb on - strand, within H281DRAFT_01236 at 73.436 kb on - strand, within H281DRAFT_01236 at 73.498 kb on - strand, within H281DRAFT_01236 at 73.654 kb on + strand, within H281DRAFT_01236 at 73.655 kb on - strand, within H281DRAFT_01236 at 73.655 kb on - strand, within H281DRAFT_01236 at 73.876 kb on + strand at 73.876 kb on + strand at 73.877 kb on - strand at 73.877 kb on - strand at 73.918 kb on + strand at 73.919 kb on - strand at 73.919 kb on - strand at 73.919 kb on - strand at 73.919 kb on - strand at 73.991 kb on + strand at 73.992 kb on - strand at 73.992 kb on - strand at 74.131 kb on + strand, within H281DRAFT_01237 at 74.198 kb on - strand, within H281DRAFT_01237
Per-strain Table
Position Strand Gene LocusTag Fraction D,L-Lactate (C) remove 72,042 + +0.1 72,100 + H281DRAFT_01234 0.15 +0.3 72,101 - H281DRAFT_01234 0.16 -0.3 72,148 - H281DRAFT_01234 0.31 -0.1 72,191 + H281DRAFT_01234 0.45 -0.1 72,191 + H281DRAFT_01234 0.45 -0.1 72,191 + H281DRAFT_01234 0.45 -0.4 72,192 - H281DRAFT_01234 0.45 +0.1 72,192 - H281DRAFT_01234 0.45 -0.2 72,409 - +0.6 72,463 - -0.7 72,608 - -0.5 72,608 - +0.5 72,608 - +0.5 72,608 - -0.1 72,610 - +0.1 72,658 + -0.6 72,659 - +0.5 72,659 - -0.1 72,714 + -0.1 72,715 - +0.6 72,715 - +0.4 72,748 - -0.4 72,761 - +0.2 72,796 + -1.2 72,872 + -0.5 72,872 + -0.4 72,899 - -0.5 72,964 - +0.1 72,964 - +0.5 72,973 - -0.1 72,976 - -0.2 73,002 - +0.1 73,002 - +0.1 73,072 + H281DRAFT_01235 0.28 +0.4 73,072 + H281DRAFT_01235 0.28 +1.1 73,072 + +3.4 73,073 - H281DRAFT_01235 0.28 +0.2 73,073 - H281DRAFT_01235 0.28 +0.7 73,330 + +0.1 73,330 + +0.2 73,330 + +0.5 73,331 - +0.0 73,332 + -0.4 73,332 + -0.0 73,332 + +0.2 73,332 + -0.7 73,333 - +0.5 73,435 + H281DRAFT_01236 0.19 -0.4 73,436 - H281DRAFT_01236 0.20 -0.3 73,436 - H281DRAFT_01236 0.20 +0.0 73,498 - H281DRAFT_01236 0.32 -0.4 73,654 + H281DRAFT_01236 0.62 +0.1 73,655 - H281DRAFT_01236 0.63 -0.0 73,655 - H281DRAFT_01236 0.63 -0.2 73,876 + -0.0 73,876 + -0.4 73,877 - +0.3 73,877 - -0.3 73,918 + +0.1 73,919 - -0.3 73,919 - +0.5 73,919 - -0.4 73,919 - -0.4 73,991 + +0.6 73,992 - +0.4 73,992 - -0.4 74,131 + H281DRAFT_01237 0.20 +0.3 74,198 - H281DRAFT_01237 0.30 -3.0
Or see this region's nucleotide sequence